RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 OLFML3Q9NRN5 406 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 APOBEC2Q9Y235 224 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 HCN4Q9Y3Q4 1203 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 LAMB1P07942 1786 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 ADGRA3Q8IWK6 1321 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 HNRNPCL1O60812 293 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 TNFAIP8O95379 198 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 MAGEA11P43364 429 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 GNA12Q03113 381 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 UBXN1Q04323 297 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 MGAT3Q09327 533 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 BNIP3Q12983 259 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 HSF5Q4G112 596 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 PPM1LQ5SGD2 360 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 ZNF658Q5TYW1 1059 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 FCRLBQ6BAA4 426 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 PM20D1Q6GTS8 502 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 ALKBH5Q6P6C2 394 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 KIAA1324Q6UXG2 1013 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 KRT28Q7Z3Y7 464 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 LIMS2Q7Z4I7 341 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 SRRM1Q8IYB3 904 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 REXO1Q8N1G1 1221 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 RASGEF1CQ8N431 466 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 SLC4A11Q8NBS3 891 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 OR5H6Q8NGV6 325 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 RFWD2Q8NHY2 731 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 C1orf216Q8TAB5 229 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 SYTL5Q8TDW5 730 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 GRK7Q8WTQ7 553 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 PYDC1Q8WXC3 89 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 KRT35Q92764 455 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 STMN2Q93045 179 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 FMO2Q99518 471 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 OCSTAMPQ9BR26 566 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 PITPNM3Q9BZ71 974 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 LHX5Q9H2C1 402 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 RAD21L1Q9H4I0 556 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 SP110Q9HB58 689 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 DNAJC17Q9NVM6 304 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 KCND2Q9NZV8 630 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 TXNDC16Q9P2K2 825 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 HECAQ9UBI9 543 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 CYB5R1Q9UHQ9 305 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 TRPC5Q9UL62 973 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 AFG3L2Q9Y4W6 797 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 PCDHB9Q9Y5E1 797 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 PCDHGA2Q9Y5H1 932 aa4.52□□□□□ -1.69
R3HDM1-206ENST00000429703 PITPNM2Q9BZ72 1349 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 A0A1W2PPW3 197 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 H3BRB1 525 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 FOXN3O00409 490 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 TOR1AO14656 332 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 AXIN1O15169 862 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 PTP4A3O75365 173 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 FAM228BP0C875 321 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 CCDC130P13994 396 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ATF7P17544 494 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 CPOXP36551 454 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ARL1P40616 181 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 GPD2P43304 727 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 MAGEA4P43358 317 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ETV1P50549 477 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 TARDBPQ13148 414 aaKnown RBP eCLIP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 SSPNQ14714 243 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 CDK10Q15131 360 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 EML3Q32P44 896 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 SLC10A5Q5PT55 438 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 TTC7BQ86TV6 843 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 CHERPQ8IWX8 916 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ULK2Q8IYT8 1036 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ZNF34Q8IZ26 560 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 RTKN2Q8IZC4 609 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 CADM2Q8N3J6 435 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ASCC1Q8N9N2 400 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 CATSPER1Q8NEC5 780 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 NCOA7Q8NI08 942 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 FANK1Q8TC84 345 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 FIG4Q92562 907 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ACDQ96AP0 544 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 RNF170Q96K19 258 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 MOGAT1Q96PD6 335 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 DEPDC7Q96QD5 511 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 YME1L1Q96TA2 773 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 IL12RB2Q99665 862 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 SEC22CQ9BRL7 303 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 TRIM55Q9BYV6 548 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 BCL2L14Q9BZR8 327 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 NAA50Q9GZZ1 169 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 HIPK3Q9H422 1215 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ERVMER34-1Q9H9K5 563 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 NANOGQ9H9S0 305 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 AVENQ9NQS1 362 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 PLSCR3Q9NRY6 295 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 PIH1D1Q9NWS0 290 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 GDAP2Q9NXN4 497 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 ZFP69BQ9UJL9 534 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 PRR12Q9ULL5 1215 aa4.51□□□□□ -1.69
R3HDM1-206ENST00000429703 PLAGL2Q9UPG8 496 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms