RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 EIF3HO15372 352 aaKnown RBP eCLIP14.28□□□□□ -0.12
RPL28-202ENST00000426763 FGF10O15520 208 aaPredicted RBP14.28□□□□□ -0.12
RPL28-202ENST00000426763 CLASP2O75122 1294 aaKnown RBP14.28□□□□□ -0.12
RPL28-202ENST00000426763 TRUB2O95900 331 aaKnown RBP14.28□□□□□ -0.12
RPL28-202ENST00000426763 CDH17Q12864 832 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 FOXD4Q12950 439 aaPredicted RBP14.28□□□□□ -0.12
RPL28-202ENST00000426763 KRT80Q6KB66 452 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 NUP93Q8N1F7 819 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 CCDC138Q96M89 665 aa14.28□□□□□ -0.12
RPL28-202ENST00000426763 ZCCHC17Q9NP64 241 aaKnown RBP14.28□□□□□ -0.12
RPL28-202ENST00000426763 CCDC85CA6NKD9 419 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 GLRA3O75311 464 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 LAG3P18627 525 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 ARL2P36404 184 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 GRAMD1BQ3KR37 738 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 SPATA17Q96L03 361 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 L2HGDHQ9H9P8 463 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 UBP1Q9NZI7 540 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 PADI3Q9ULW8 664 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 CUL3Q13618 768 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 TAF11Q15544 211 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 SPDYE7PQ495Y7 208 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 FAM183BPQ6ZVS7 135 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 PRUNE1Q86TP1 453 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 LZICQ8WZA0 190 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 LENG9Q96B70 501 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 VAT1Q99536 393 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 DHX33Q9H6R0 707 aaKnown RBP14.27□□□□□ -0.12
RPL28-202ENST00000426763 UBA2Q9UBT2 640 aaPredicted RBP14.27□□□□□ -0.12
RPL28-202ENST00000426763 NUDT5Q9UKK9 219 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 CDY1Q9Y6F8 540 aa14.27□□□□□ -0.12
RPL28-202ENST00000426763 B4GALT4O60513 344 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 STMN1P16949 149 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 ALDH18A1P54886 795 aaKnown RBP14.27□□□□□ -0.13
RPL28-202ENST00000426763 NT5DC3Q86UY8 548 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 E2F7Q96AV8 911 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 YIPF2Q9BWQ6 316 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 SPG21Q9NZD8 308 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 CDYLQ9Y232 598 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 GJB6O95452 261 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 PYGMP11217 842 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 BMP6P22004 513 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 TERF2Q15554 542 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 ZBTB41Q5SVQ8 909 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 KATNAL2Q8IYT4 538 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 MYO1HQ8N1T3 1032 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.27□□□□□ -0.13
RPL28-202ENST00000426763 DCDC2Q9UHG0 476 aa14.27□□□□□ -0.13
RPL28-202ENST00000426763 PHF20L1A8MW92 1017 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 MAP3K13O43283 966 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 H2AFYO75367 372 aaKnown RBP14.26□□□□□ -0.13
RPL28-202ENST00000426763 PCDH8O95206 1070 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 CNTFP26441 200 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 SHOC2Q9UQ13 582 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 ADGRA2Q96PE1 1338 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 MEFVO15553 781 aaPredicted RBP14.26□□□□□ -0.13
RPL28-202ENST00000426763 ATP5BP06576 529 aaKnown RBP14.26□□□□□ -0.13
RPL28-202ENST00000426763 ZNF143P52747 638 aaPredicted RBP14.26□□□□□ -0.13
RPL28-202ENST00000426763 KCNMA1Q12791 1236 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 NLRP9Q7RTR0 991 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 HNRNPLLQ8WVV9 542 aaKnown RBP14.26□□□□□ -0.13
RPL28-202ENST00000426763 CORO1BQ9BR76 489 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 NPHS2Q9NP85 383 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 RNF112Q9ULX5 631 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 MRPS23Q9Y3D9 190 aaKnown RBP14.26□□□□□ -0.13
RPL28-202ENST00000426763 F8VP50 259 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 HDCP19113 662 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 POLR2EP19388 210 aaKnown RBP14.26□□□□□ -0.13
RPL28-202ENST00000426763 PLA2G4AP47712 749 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 MAMLD1Q13495 774 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 PKN3Q6P5Z2 889 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 CCDC126Q96EE4 140 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 TTPALQ9BTX7 342 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
RPL28-202ENST00000426763 APOC4-APOC2K7ER74 178 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 APOC2P02655 101 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 SMARCB1Q12824 385 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 TEX12Q9BXU0 123 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 SEPT3Q9UH03 358 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 PTPN7P35236 360 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 WDR93Q6P2C0 686 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 C16orf59Q7L2K0 433 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 PRKD2Q9BZL6 878 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 ETNK1Q9HBU6 452 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 SYTL2Q9HCH5 934 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 ARHGAP28Q9P2N2 729 aa14.26□□□□□ -0.13
RPL28-202ENST00000426763 DUOX1Q9NRD9 1551 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 FRMD3A2A2Y4 597 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 CYP1A2P05177 515 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 MZF1P28698 734 aaPredicted RBP14.25□□□□□ -0.13
RPL28-202ENST00000426763 ARMC2Q8NEN0 867 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 TEKT4Q8WW24 435 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 BSNDQ8WZ55 320 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 FAM161BQ96MY7 647 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 OR12D3Q9UGF7 316 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 SMIM28A0A1B0GU29 152 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 IGF2BP3O00425 579 aaKnown RBP eCLIP14.25□□□□□ -0.13
RPL28-202ENST00000426763 BRCC3P46736 316 aa14.25□□□□□ -0.13
RPL28-202ENST00000426763 SERPINB4P48594 390 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms