RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 SLC27A6Q9Y2P4 619 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 ZFHX4Q86UP3 3567 aa16.93■□□□□ 0.3
COL18A1-205ENST00000423214 SLC12A8A0AV02 714 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 WASH3PC4AMC7 463 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 ARHGAP33O14559 1287 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 SYNCRIPO60506 623 aaKnown RBP16.92■□□□□ 0.3
COL18A1-205ENST00000423214 ZNF202O95125 648 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 KLKB1P03952 638 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 GNSP15586 552 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 TKTL1P51854 596 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 BCAT1P54687 386 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 RAD23BP54727 409 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 YWHAEP62258 255 aaKnown RBP16.92■□□□□ 0.3
COL18A1-205ENST00000423214 SIM1P81133 766 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-205ENST00000423214 ARID5AQ03989 594 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 SEMA3BQ13214 749 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 NUMA1Q14980 2115 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 GEN1Q17RS7 908 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 GOLGA7BQ2TAP0 167 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 PLEKHG6Q3KR16 790 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 FUT11Q495W5 492 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 WDR45BQ5MNZ6 344 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 FYB2Q5VWT5 728 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 ARHGAP17Q68EM7 881 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 DENND1CQ8IV53 801 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 PLD4Q96BZ4 506 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 PRDM16Q9HAZ2 1276 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 OLA1Q9NTK5 396 aaKnown RBP16.92■□□□□ 0.3
COL18A1-205ENST00000423214 RMND1Q9NWS8 449 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 HESX1Q9UBX0 185 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 FBXO10Q9UK96 956 aa16.92■□□□□ 0.3
COL18A1-205ENST00000423214 AKAP13Q12802 2813 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 TMEM8BA6NDV4 472 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 UPK3BL1B0FP48 263 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 UPK3BL2E5RIL1 263 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 TOP3BO95985 862 aaKnown RBP16.91■□□□□ 0.3
COL18A1-205ENST00000423214 CD6P30203 668 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 ZNF132P52740 706 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 EIF4HQ15056 248 aaKnown RBP16.91■□□□□ 0.3
COL18A1-205ENST00000423214 RAB41Q5JT25 222 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 PIP4P1Q86T03 277 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 CPXM2Q8N436 756 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 ANKRD52Q8NB46 1076 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 DDI1Q8WTU0 396 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 UBXN6Q9BZV1 441 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 CIPCQ9C0C6 399 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 LRRC4Q9HBW1 653 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 TSPAN16Q9UKR8 245 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 AGO1Q9UL18 857 aaKnown RBP16.91■□□□□ 0.3
COL18A1-205ENST00000423214 ASPMQ8IZT6 3477 aa16.91■□□□□ 0.3
COL18A1-205ENST00000423214 SPAARA0A1B0GVQ0 90 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 XPO1O14980 1071 aaKnown RBP16.9■□□□□ 0.3
COL18A1-205ENST00000423214 SLC16A3O15427 465 aaKnown RBP16.9■□□□□ 0.3
COL18A1-205ENST00000423214 ZBED1O96006 694 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 ACADMP11310 421 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 CD19P15391 556 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 RDXP35241 583 aaKnown RBP16.9■□□□□ 0.3
COL18A1-205ENST00000423214 IL12RB1P42701 662 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 BST2Q10589 180 aaKnown RBP16.9■□□□□ 0.3
COL18A1-205ENST00000423214 ZNF234Q14588 700 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 SGO2Q562F6 1265 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 CACUL1Q86Y37 369 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 SIX6OS1Q8N1H7 587 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 OR2I1PQ8NGU4 316 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 RNF139Q8WU17 664 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 IPO9Q96P70 1041 aaKnown RBP16.9■□□□□ 0.3
COL18A1-205ENST00000423214 ULBP1Q9BZM6 244 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 THAP10Q9P2Z0 257 aaPredicted RBP16.9■□□□□ 0.3
COL18A1-205ENST00000423214 ZMIZ1Q9ULJ6 1067 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 WASF3Q9UPY6 502 aa16.9■□□□□ 0.3
COL18A1-205ENST00000423214 HYAL3O43820 417 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-205ENST00000423214 NCAM1P13591 858 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 HARS2P49590 506 aaKnown RBP16.89■□□□□ 0.29
COL18A1-205ENST00000423214 PDE4CQ08493 712 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 ADIGQ0VDE8 80 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 PNOCQ13519 176 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 CUL2Q13617 745 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 CBWD6Q4V339 395 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 CBWD3Q5JTY5 395 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 CBWD5Q5RIA9 395 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 SERPINA13PQ6UXR4 307 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 PRCCQ92733 491 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-205ENST00000423214 TATDN2Q93075 761 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 SIPA1Q96FS4 1042 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 P2RY11Q96G91 374 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 TOE1Q96GM8 510 aaKnown RBP16.89■□□□□ 0.29
COL18A1-205ENST00000423214 ZNF419Q96HQ0 510 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-205ENST00000423214 SLC2A11Q9BYW1 496 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 DNAAF2Q9NVR5 837 aaKnown RBP16.89■□□□□ 0.29
COL18A1-205ENST00000423214 USP36Q9P275 1121 aaKnown RBP16.89■□□□□ 0.29
COL18A1-205ENST00000423214 PTPRBP23467 1997 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 WDFY3Q8IZQ1 3526 aa16.89■□□□□ 0.29
COL18A1-205ENST00000423214 EPHX1P07099 455 aa16.88■□□□□ 0.29
COL18A1-205ENST00000423214 HNRNPDQ14103 355 aaKnown RBP16.88■□□□□ 0.29
COL18A1-205ENST00000423214 METTL3Q86U44 580 aaKnown RBP16.88■□□□□ 0.29
COL18A1-205ENST00000423214 FMNL3Q8IVF7 1028 aa16.88■□□□□ 0.29
COL18A1-205ENST00000423214 FAM217AQ8IXS0 508 aa16.88■□□□□ 0.29
COL18A1-205ENST00000423214 ZCCHC14Q8WYQ9 949 aaKnown RBP16.88■□□□□ 0.29
COL18A1-205ENST00000423214 PIWIL1Q96J94 861 aaKnown RBP16.88■□□□□ 0.29
COL18A1-205ENST00000423214 GPR174Q9BXC1 333 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms