RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 CCDC114Q96M63 670 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 GCNAQ96QF7 691 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PRAM1Q96QH2 718 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 AGAP2Q99490 1192 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 C1orf43Q9BWL3 253 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PHF7Q9BWX1 381 aaPredicted RBP5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 DNAJC18Q9H819 358 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 ZBTB40Q9NUA8 1239 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 DDX43Q9NXZ2 648 aaKnown RBP5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MARCH4Q9P2E8 410 aaPredicted RBP5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 ARHGAP20Q9P2F6 1191 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 ZMAT5Q9UDW3 170 aaKnown RBP5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CNOT7Q9UIV1 285 aaKnown RBP5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MID2Q9UJV3 735 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PIN4Q9Y237 131 aaKnown RBP5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 FPGT-TNNI3KV9GXZ4 949 aa5.86□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MBD3L4A6NDZ8 208 aaPredicted RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MBD3L3A6NE82 208 aaPredicted RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PRAMEF25A6NGN4 478 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 TMEM233B4DJY2 109 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 TSPAN4O14817 238 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 IKBKBO14920 756 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 COQ9O75208 318 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 BCAS2O75934 225 aaPredicted RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PDE8BO95263 885 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MATN4O95460 622 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 C22orf31O95567 290 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 NTSR2O95665 410 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PRLP01236 227 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 IFNB1P01574 187 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 TFRCP02786 760 aaKnown RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 SPARCP09486 303 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 FTH1P19P0C7X4 201 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CKBP12277 381 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 RARGP13631 454 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 TMEM11P17152 192 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PTPN1P18031 435 aaKnown RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 KCNA5P22460 613 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 KELP23276 732 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CPT2P23786 658 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CCNCP24863 283 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PTAFRP25105 342 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 GJA4P35212 333 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 BSGP35613 385 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PPARGP37231 505 aaPredicted RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 IL15P40933 162 aaPredicted RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 KCNJ5P48544 419 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MAPKAPK2P49137 400 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 RBM5P52756 815 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 INHBEP58166 350 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 EIF4A1P60842 406 aaKnown RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CCNA1P78396 465 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MGAT5Q09328 741 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 TMEM62Q0P6H9 643 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 RAB32Q13637 225 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 GEN1Q17RS7 908 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 SLC5A9Q2M3M2 681 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CAVIN4Q5BKX8 364 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 RAB41Q5JT25 222 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 C9orf152Q5JTZ5 239 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 GLRA4Q5JXX5 417 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 EMC10Q5UCC4 262 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 GADL1Q6ZQY3 521 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 RSPH3Q86UC2 560 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 KRT73Q86Y46 540 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 FAM90A1Q86YD7 464 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 RHOT2Q8IXI1 618 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 KIF18AQ8NI77 898 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 IFI44Q8TCB0 444 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 FAM216AQ8WUB2 273 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 GAB3Q8WWW8 586 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 ASB15Q8WXK1 588 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MR1Q95460 341 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CYFIP2Q96F07 1278 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 TMX3Q96JJ7 454 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 GBP4Q96PP9 640 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 MROH8Q9H579 483 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 NSUN3Q9H649 340 aaKnown RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 VEZTQ9HBM0 779 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 LTB4R2Q9NPC1 389 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 PCDHB16Q9NRJ7 776 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 SIRT3Q9NTG7 399 aaPredicted RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 ANO10Q9NW15 660 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 SUCLA2Q9P2R7 463 aaPredicted RBP5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 ITM2BQ9Y287 266 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 TRPV2Q9Y5S1 764 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 SQORQ9Y6N5 450 aa5.85□□□□□ -1.47
PTP4A1P1-201ENST00000420539 IGSF1Q8N6C5 1336 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 RNF103-CHMP3A0A140T963 221 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 LINC00854A0A1B0GVQ3 168 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 A0A1W2PRV1 198 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 LRRD1A4D1F6 860 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 CTAGE9A4FU28 777 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 FAM90A18PA6NE21 464 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 ZNF503-AS2A6NEH8 195 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 FAM90A16PA6NEW6 464 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 LIPT2A6NK58 231 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 FAM90A9PA6NNJ1 464 aa5.84□□□□□ -1.47
PTP4A1P1-201ENST00000420539 FAM90A5PA8MXJ8 464 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms