RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 RPL34P49207 117 aaKnown RBP11.55□□□□□ -0.56
SSBP3-206ENST00000420121 DGKGP49619 791 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 RGS7P49802 495 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 MFAP3P55082 362 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 SLC8A3P57103 927 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 UBE2HP62256 183 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 CAMK4Q16566 473 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 GEN1Q17RS7 908 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 PREPLQ4J6C6 727 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-206ENST00000420121 BSPRYQ5W0U4 402 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 MSANTD2Q6P1R3 559 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 DENND1CQ8IV53 801 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 FMNL3Q8IVF7 1028 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 TRIML1Q8N9V2 468 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 CLEC4CQ8WTT0 213 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 HMGB4Q8WW32 186 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 EDEM1Q92611 657 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 PLD4Q96BZ4 506 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 PIWIL1Q96J94 861 aaKnown RBP11.55□□□□□ -0.56
SSBP3-206ENST00000420121 DCLK3Q9C098 648 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 POLMQ9NP87 494 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-206ENST00000420121 CNGB3Q9NQW8 809 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 VPS45Q9NRW7 570 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 SFMBT1Q9UHJ3 866 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 STOML2Q9UJZ1 356 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 ZNF510Q9Y2H8 683 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 ASCC3Q8N3C0 2202 aaKnown RBP11.55□□□□□ -0.56
SSBP3-206ENST00000420121 PATE3B3GLJ2 98 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 WASH3PC4AMC7 463 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 PIK3R2O00459 728 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 MSI1O43347 362 aaKnown RBP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 CAVIN2O95810 425 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 IGLV3-27P01718 113 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 FYNP06241 537 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 LCP1P13796 627 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 CHKAP35790 457 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 CREB5Q02930 508 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 ENPP2Q13822 863 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 AASDHQ4L235 1098 aaPredicted RBP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 TMEM215Q68D42 235 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 RSRC2Q7L4I2 434 aaKnown RBP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 TRMT11Q7Z4G4 463 aaKnown RBP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 C11orf74Q86VG3 221 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 PHF12Q96QT6 1004 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 INTS2Q9H0H0 1204 aaKnown RBP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 CD93Q9NPY3 652 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 ABCC13Q9NSE7 274 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 OLA1Q9NTK5 396 aaKnown RBP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 CACNA2D2Q9NY47 1150 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 CALCOCO1Q9P1Z2 691 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 RWDD2AQ9UIY3 292 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 STRIP2Q9ULQ0 834 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 HBS1LQ9Y450 684 aaKnown RBP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 RAD54BQ9Y620 910 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 NYNRINQ9P2P1 1898 aaKnown RBP11.54□□□□□ -0.56
SSBP3-206ENST00000420121 CHD8Q9HCK8 2581 aa11.54□□□□□ -0.56
SSBP3-206ENST00000420121 CACNA1EQ15878 2313 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 TPRP12270 2363 aaKnown RBP11.53□□□□□ -0.56
SSBP3-206ENST00000420121 LNP1A1A4G5 178 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 BECN2A8MW95 431 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 M0QYV0 167 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 NDUFV2P19404 249 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 HOXD9P28356 352 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-206ENST00000420121 PTGER3P43115 390 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 GPD2P43304 727 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 SGSHP51688 502 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 APBA1Q02410 837 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 STILQ15468 1287 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 STPG1Q5TH74 334 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 RNF43Q68DV7 783 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 GJB7Q6PEY0 223 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 NUDT18Q6ZVK8 323 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 CHPFQ8IZ52 775 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 SIX6OS1Q8N1H7 587 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 C12orf50Q8NA57 414 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-206ENST00000420121 IPO4Q8TEX9 1081 aaKnown RBP11.53□□□□□ -0.56
SSBP3-206ENST00000420121 IRGQQ8WZA9 623 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 ERLEC1Q96DZ1 483 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 HSFY1Q96LI6 401 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 IPO9Q96P70 1041 aaKnown RBP11.53□□□□□ -0.56
SSBP3-206ENST00000420121 SLC6A17Q9H1V8 727 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 ACP6Q9NPH0 428 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 TMEM74BQ9NUR3 256 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 CHMP5Q9NZZ3 219 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 BCCIPQ9P287 314 aaKnown RBP eCLIP11.53□□□□□ -0.56
SSBP3-206ENST00000420121 THAP10Q9P2Z0 257 aaPredicted RBP11.53□□□□□ -0.56
SSBP3-206ENST00000420121 CYTH4Q9UIA0 394 aa11.53□□□□□ -0.56
SSBP3-206ENST00000420121 ACACBO00763 2458 aa11.52□□□□□ -0.56
SSBP3-206ENST00000420121 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 IGHV1OR15-9A0A0B4J2B8 117 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 LTFP02788 710 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 IL12RB1P42701 662 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 DHPSP49366 369 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-206ENST00000420121 CETN1Q12798 172 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 NUMA1Q14980 2115 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 PPM1JQ5JR12 505 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 PEAR1Q5VY43 1037 aaPredicted RBP11.52□□□□□ -0.57
SSBP3-206ENST00000420121 DENND1BQ6P3S1 775 aa11.52□□□□□ -0.57
SSBP3-206ENST00000420121 TRIM65Q6PJ69 517 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms