RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 TLR6Q9Y2C9 796 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 NOTCH4Q99466 2003 aa8.81□□□□□ -1
TRIM48-201ENST00000417545 LEFTY2O00292 366 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SLC9A3R1O14745 358 aaPredicted RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 MOSPD3O75425 235 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 MOCS3O95396 460 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 PAPLNO95428 1278 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 CORO1AP31146 461 aaKnown RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 SLC11A2P49281 568 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 PGFP49763 221 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SLC7A9P82251 487 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 TFF2Q03403 129 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 MTA1Q13330 715 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 NNTQ13423 1086 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 ACAP1Q15027 740 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SMAD2Q15796 467 aaKnown RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 CCDC14Q49A88 953 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 EFHC2Q5JST6 749 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 BRMS1LQ5PSV4 323 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 PPP1R15BQ5SWA1 713 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 FAM131BQ86XD5 332 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 ARID3BQ8IVW6 561 aaPredicted RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 SH3RF2Q8TEC5 729 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 FNIP1Q8TF40 1166 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SUSD6Q92537 303 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 ASB16Q96NS5 453 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SLC22A12Q96S37 553 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 MYADMQ96S97 322 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 NPY6RQ99463 290 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 KXD1Q9BQD3 176 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 WDCPQ9H6R7 721 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 PRDM6Q9NQX0 595 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.8□□□□□ -1
TRIM48-201ENST00000417545 ARHGAP26Q9UNA1 814 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 ZNF510Q9Y2H8 683 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 REXO2Q9Y3B8 237 aaKnown RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 TCRBV5S1A1TA0A578 114 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 BTNL10A8MVZ5 291 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 KIF5CO60282 957 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 PROSCO94903 275 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 PRAMEF12O95522 483 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 CYBBP04839 570 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 FYNP06241 537 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 LAMP2P13473 410 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 IL9P15248 144 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SLC1A1P43005 524 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 RING1Q06587 406 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 KRT81Q14533 505 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 HS1BP3Q53T59 392 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 ZC3H12AQ5D1E8 599 aaKnown RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 FAM78AQ5JUQ0 283 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 C11orf63Q6NUN7 778 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 LRRC31Q6UY01 552 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 CHSY1Q86X52 802 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 DENND1CQ8IV53 801 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 CCDC117Q8IWD4 279 aaPredicted RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 RNF10Q8N5U6 811 aaKnown RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 KIAA1524Q8TCG1 905 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 BPIFB1Q8TDL5 484 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 USP13Q92995 863 aaPredicted RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 KLF16Q9BXK1 252 aaPredicted RBP8.8□□□□□ -1
TRIM48-201ENST00000417545 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 RNF38Q9H0F5 515 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 TKTL2Q9H0I9 626 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SIK2Q9H0K1 926 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 ZWILCHQ9H900 591 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 GKN1Q9NS71 199 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 TBC1D14Q9P2M4 693 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 TRIM10Q9UDY6 481 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 PCSK1NQ9UHG2 260 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 AMFRQ9UKV5 643 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 PYCARDQ9ULZ3 195 aa8.8□□□□□ -1
TRIM48-201ENST00000417545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.8□□□□□ -1
TRIM48-201ENST00000417545 E2F8A0AVK6 867 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 RCCD1A6NED2 376 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 HEPACAM2A8MVW5 462 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 C2CD4DB7Z1M9 353 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 SCAMP3O14828 347 aaKnown RBP8.79□□□□□ -1
TRIM48-201ENST00000417545 BUB1BO60566 1050 aaPredicted RBP8.79□□□□□ -1
TRIM48-201ENST00000417545 STC2O76061 302 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 MTA2O94776 668 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 OLFM2O95897 454 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 KRT7P08729 469 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 MAN1A1P33908 653 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 DEKP35659 375 aaKnown RBP8.79□□□□□ -1
TRIM48-201ENST00000417545 CETN2P41208 172 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 VIPR2P41587 438 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 KCNQ1P51787 676 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 PITX1P78337 314 aaPredicted RBP8.79□□□□□ -1
TRIM48-201ENST00000417545 OGDHQ02218 1023 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 USP4Q13107 963 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 PPP2R5DQ14738 602 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 TRNP1Q6NT89 227 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 PEX26Q7Z412 305 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 SLFN11Q7Z7L1 901 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 UBL4BQ8N7F7 174 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 ST13P5Q8NFI4 369 aaPredicted RBP8.79□□□□□ -1
TRIM48-201ENST00000417545 TRIM58Q8NG06 486 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 TPCN2Q8NHX9 752 aa8.79□□□□□ -1
TRIM48-201ENST00000417545 DEPDC1BQ8WUY9 529 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms