RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	NFE2	Q16621	373 aa	Predicted RBP	9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	GRAMD4	Q6IC98	578 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CRELD2	Q6UXH1	353 aa	Predicted RBP	9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	TPGS1	Q6ZTW0	290 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	SPATA2L	Q8IUW3	424 aa	Predicted RBP	9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	FAM177A1	Q8N128	213 aa	Predicted RBP	9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	EID2	Q8N6I1	236 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CXorf38	Q8TB03	319 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	SNX29	Q8TEQ0	813 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	MYLPF	Q96A32	169 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	MED8	Q96G25	268 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	WBP1	Q96G27	269 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CNDP2	Q96KP4	475 aa	Known RBP	9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ACBD6	Q9BR61	282 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	MSTO1	Q9BUK6	570 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CCSER2	Q9H7U1	834 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	RAB6B	Q9NRW1	208 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	IGSF5	Q9NSI5	407 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	GDF2	Q9UK05	429 aa	Predicted RBP	9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	BOD1L1	Q8NFC6	3051 aa		9.19	□□□□□ -0.94
NIF3L1-206	ENST00000416651	PMS2P1	A4D2B8	440 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CAPN8	A6NHC0	703 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	NEDD8-MDP1	E9PL57	170 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651		F8VP50	259 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	XPOT	O43592	962 aa	Known RBP	9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	PCDHGA12	O60330	932 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	LDOC1	O95751	146 aa	Predicted RBP	9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	MPO	P05164	745 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	PLCG1	P19174	1290 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	LIG4	P49917	911 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CCT8	P50990	548 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CFAP221	Q4G0U5	840 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ARSH	Q5FYA8	562 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	LRRK2	Q5S007	2527 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	FAM171B	Q6P995	826 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	IL27RA	Q6UWB1	636 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	KDM7A	Q6ZMT4	941 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	DENND5B	Q6ZUT9	1274 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	TRMT11	Q7Z4G4	463 aa	Known RBP	9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	TMPRSS6	Q8IU80	811 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	FSIP1	Q8NA03	581 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CADM4	Q8NFZ8	388 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ERMN	Q8TAM6	284 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	SORCS1	Q8WY21	1168 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	HIC2	Q96JB3	615 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	DRC1	Q96MC2	740 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	TTLL2	Q9BWV7	592 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	SUV39H2	Q9H5I1	410 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	EBF2	Q9HAK2	575 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	PRM3	Q9NNZ6	103 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ABCB6	Q9NP58	842 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	HSPBP1	Q9NZL4	362 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CHORDC1	Q9UHD1	332 aa	Predicted RBP	9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CLEC4E	Q9ULY5	219 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	AGAP1	Q9UPQ3	857 aa		9.18	□□□□□ -0.94
NIF3L1-206	ENST00000416651	BSN	Q9UPA5	3926 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	USP9Y	O00507	2555 aa	Predicted RBP	9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651		A0A1B0GTQ1	180 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651		A0A1W2PNU3	283 aa	Predicted RBP	9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	SLC9A3R1	O14745	358 aa	Predicted RBP	9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	KLK10	O43240	276 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	PFKFB2	O60825	505 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	TBX18	O95935	607 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ITGB3	P05106	788 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	THBS1	P07996	1170 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	PDGFRB	P09619	1106 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	GLDC	P23378	1020 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	PRKCH	P24723	683 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ACTN2	P35609	894 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	NCKAP1L	P55160	1127 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	TMPRSS3	P57727	454 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ZRSR1	Q15695	479 aa	Known RBP	9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	SOWAHA	Q2M3V2	549 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	LINC00303	Q3SY05	128 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	BTBD8	Q5XKL5	378 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CPLX2	Q6PUV4	134 aa	Known RBP	9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ZNF366	Q8N895	744 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	C1orf127	Q8N9H9	656 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	KBTBD7	Q8WVZ9	684 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	IGSF8	Q969P0	613 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	BIRC7	Q96CA5	298 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	SIPA1	Q96FS4	1042 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	SRPK3	Q9UPE1	567 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651	NFE2L3	Q9Y4A8	694 aa		9.17	□□□□□ -0.94
NIF3L1-206	ENST00000416651		A0A1B0GTH6	734 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CLDN5	O00501	218 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	GABRD	O14764	452 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	HNRNPDL	O14979	420 aa	Known RBP	9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CASC3	O15234	703 aa	Known RBP	9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	EFS	O43281	561 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	TYR	P14679	529 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	XBP1	P17861	261 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	HNF1B	P35680	557 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	MAGEA11	P43364	429 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	AFF3	P51826	1226 aa	Known RBP	9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	CYP27A1	Q02318	531 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	VAC14	Q08AM6	782 aa		9.16	□□□□□ -0.94
NIF3L1-206	ENST00000416651	ST3GAL1	Q11201	340 aa		9.16	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms