RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 OSER1Q9NX31 292 aa6.67□□□□□ -1.34
USP54-202ENST00000413442 SMPD4Q9NXE4 827 aa6.67□□□□□ -1.34
USP54-202ENST00000413442 AGO1Q9UL18 857 aaKnown RBP6.67□□□□□ -1.34
USP54-202ENST00000413442 PCDHGA5Q9Y5G8 931 aa6.67□□□□□ -1.34
USP54-202ENST00000413442 MYOFQ9NZM1 2061 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 A0A1W2PQC6 194 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 LGALS16A8MUM7 142 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 BECN2A8MW95 431 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 PES1O00541 588 aaKnown RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 AXIN1O15169 862 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 ACSL4O60488 711 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 RNF40O75150 1001 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 EGFP01133 1207 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 ASLP04424 464 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 ATP5BP06576 529 aaKnown RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 RETP07949 1114 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 CISD3P0C7P0 127 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 LCP1P13796 627 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 CYP11B1P15538 503 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 ZNF18P17022 549 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 DESP17661 470 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 ABCB4P21439 1286 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 BRD2P25440 801 aaKnown RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 NTSR1P30989 418 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 CORO1AP31146 461 aaKnown RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 CCR1P32246 355 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SOX9P48436 509 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 ZNF165P49910 485 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 VASPP50552 380 aaPredicted RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 CDR1P51861 262 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 TBX4P57082 545 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 FOXK2Q01167 660 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SLC6A3Q01959 620 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 TYRO3Q06418 890 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 EIF4EBP2Q13542 120 aaPredicted RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 GAS6Q14393 721 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 KRT31Q15323 416 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SYCP1Q15431 976 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 CRY1Q16526 586 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 GAB4Q2WGN9 574 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 FIGNQ5HY92 759 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 BRMS1LQ5PSV4 323 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 DPY19L2P1Q6NXN4 242 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SLC36A4Q6YBV0 504 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SND1Q7KZF4 910 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP54-202ENST00000413442 SLC26A9Q7LBE3 791 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 BHLHA9Q7RTU4 235 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 RABEPKQ7Z6M1 372 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 KIAA0907Q7Z7F0 614 aaPredicted RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 ERICH1Q86X53 443 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 PHTF2Q8N3S3 785 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SUMF1Q8NBK3 374 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 RPLP0P6Q8NHW5 317 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 RIN3Q8TB24 985 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 GAB3Q8WWW8 586 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 ELMO3Q96BJ8 720 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 CHFRQ96EP1 664 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 PGAP3Q96FM1 320 aaPredicted RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 SLC39A13Q96H72 371 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 VCPIP1Q96JH7 1222 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 C1orf74Q96LT6 269 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SPAG5Q96R06 1193 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 NCAPGQ9BPX3 1015 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 VPS16Q9H269 839 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 FBRSL1Q9HCM7 1045 aaKnown RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 SIX2Q9NPC8 291 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 DONSONQ9NYP3 566 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SUN2Q9UH99 717 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 RASAL2Q9UJF2 1139 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 GMEB2Q9UKD1 530 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 TPX2Q9ULW0 747 aaKnown RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 STAP1Q9ULZ2 295 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 SCML1Q9UN30 329 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 PLA2G4CQ9UP65 541 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 BZW2Q9Y6E2 419 aaKnown RBP6.66□□□□□ -1.34
USP54-202ENST00000413442 KIAA1549LQ6ZVL6 1849 aa6.66□□□□□ -1.34
USP54-202ENST00000413442 MUC6Q6W4X9 2439 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 KCNU1A8MYU2 1149 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 MOCS3O95396 460 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 IGLV3-25P01717 112 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 APOEP02649 317 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 KLKB1P03952 638 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 TPM3P06753 285 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 FERP16591 822 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 HOXD12P35452 270 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 SOX5P35711 763 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 NNMTP40261 264 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 MATKP42679 507 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 PLK1P53350 603 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 COPB1P53618 953 aaKnown RBP6.65□□□□□ -1.34
USP54-202ENST00000413442 GSCP56915 257 aaPredicted RBP6.65□□□□□ -1.34
USP54-202ENST00000413442 SATB1Q01826 763 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 CDR2Q01850 454 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 UBXN1Q04323 297 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 ZBTB16Q05516 673 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 SULT2A1Q06520 285 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 PDCLQ13371 301 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 ENPP2Q13822 863 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 RAPGEF1Q13905 1077 aa6.65□□□□□ -1.34
USP54-202ENST00000413442 SIM2Q14190 667 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms