RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 C2orf40Q9H1Z8 148 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 PCDH18Q9HCL0 1135 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 CDH22Q9UJ99 828 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 ADAMTS6Q9UKP5 1117 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 EMCNQ9ULC0 261 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 HEY1Q9Y5J3 304 aa18.2■□□□□ 0.5
SDCBP-202ENST00000413219 ITM2AO43736 263 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 GAS2O43903 313 aaKnown RBP18.19■□□□□ 0.5
SDCBP-202ENST00000413219 PLIN3O60664 434 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 CDH8P55286 799 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 NAB1Q13506 487 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 FAM160B1Q5W0V3 765 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 TSHZ1Q6ZSZ6 1077 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 KRT27Q7Z3Y8 459 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 PCDH19Q8TAB3 1148 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 NAT14Q8WUY8 206 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 ATP2A3Q93084 1043 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 TWNKQ96RR1 684 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 NDNQ99608 321 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 ZNF670Q9BS34 389 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 SMYD3Q9H7B4 428 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 DCDC2Q9UHG0 476 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 SIX4Q9UIU6 781 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 SF3B1O75533 1304 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■■■■ 66.8
SDCBP-202ENST00000413219 OPHN1O60890 802 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 ACAT1P24752 427 aaKnown RBP18.19■□□□□ 0.5
SDCBP-202ENST00000413219 IDH3AP50213 366 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 CLCN2P51788 898 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 BACE1P56817 501 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 MXD4Q14582 209 aaPredicted RBP18.19■□□□□ 0.5
SDCBP-202ENST00000413219 INSCQ1MX18 579 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 C15orf59Q2T9L4 293 aaPredicted RBP18.19■□□□□ 0.5
SDCBP-202ENST00000413219 ANKRD20A4Q4UJ75 823 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 RALGPS1Q5JS13 557 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 N4BP2L1Q5TBK1 243 aaPredicted RBP18.19■□□□□ 0.5
SDCBP-202ENST00000413219 RTKN2Q8IZC4 609 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 OPTNQ96CV9 577 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 PTPRHQ9HD43 1115 aa18.19■□□□□ 0.5
SDCBP-202ENST00000413219 LYPLA1O75608 230 aaPredicted RBP18.18■□□□□ 0.5
SDCBP-202ENST00000413219 KRT19P08727 400 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 AQP4P55087 323 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 RPL10AP62906 217 aaKnown RBP18.18■□□□□ 0.5
SDCBP-202ENST00000413219 DEUP1Q05D60 604 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 LAMTOR4Q0VGL1 99 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 SEMA5AQ13591 1074 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 ITGA9Q13797 1035 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 DENND5BQ6ZUT9 1274 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 MPP5Q8N3R9 675 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 SHKBP1Q8TBC3 707 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 EZH1Q92800 747 aaPredicted RBP18.18■□□□□ 0.5
SDCBP-202ENST00000413219 VRTNQ9H8Y1 702 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 POMPQ9Y244 141 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 MDM4O15151 490 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 METTL18O95568 372 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 PROCP04070 461 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 COL11A1P12107 1806 aaPredicted RBP18.18■□□□□ 0.5
SDCBP-202ENST00000413219 MLNP12872 115 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 ATICP31939 592 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 CHN2P52757 468 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 EPHB1P54762 984 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 TNFAIP1Q13829 316 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 TMEM132BQ14DG7 1078 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 PCLAFQ15004 111 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 MMEL1Q495T6 779 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 RAB6CQ53S08 254 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 LPCAT4Q643R3 524 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 PDPK2PQ6A1A2 396 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 OR6B2Q6IFH4 312 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 FAM183BPQ6ZVS7 135 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 MAVSQ7Z434 540 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 POU5F2Q8N7G0 328 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 DNERQ8NFT8 737 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 FAM167AQ96KS9 214 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 RAB6CQ9H0N0 254 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 HMGXB4Q9UGU5 601 aa18.18■□□□□ 0.5
SDCBP-202ENST00000413219 RLFQ13129 1914 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 ATP9BO43861 1147 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 TOP3BO95985 862 aaKnown RBP18.17■□□□□ 0.5
SDCBP-202ENST00000413219 ITGAXP20702 1163 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 PEX2P28328 305 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 HARS2P49590 506 aaKnown RBP18.17■□□□□ 0.5
SDCBP-202ENST00000413219 STAT5BP51692 787 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 NIPAL4Q0D2K0 466 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 ORC1Q13415 861 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 PDK3Q15120 406 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 CCDC14Q49A88 953 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 EXOC8Q8IYI6 725 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 FBXW8Q8N3Y1 598 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 B4GALNT2Q8NHY0 566 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 CDKL2Q92772 493 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 SORT1Q99523 831 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 FAM124BQ9H5Z6 455 aaPredicted RBP18.17■□□□□ 0.5
SDCBP-202ENST00000413219 PHIPQ8WWQ0 1821 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 COL4A5P29400 1685 aa18.17■□□□□ 0.5
SDCBP-202ENST00000413219 A0A1B0GVG6 124 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 ZNF195O14628 629 aa18.16■□□□□ 0.5
SDCBP-202ENST00000413219 PENKP01210 267 aaPredicted RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 ALDOAP04075 364 aaKnown RBP18.16■□□□□ 0.5
SDCBP-202ENST00000413219 P4HA1P13674 534 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms