RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SLCO6A1Q86UG4 719 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 SETD7Q8WTS6 366 aaKnown RBP14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 PRCCQ92733 491 aaPredicted RBP14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 CDK5RAP1Q96SZ6 601 aaKnown RBP14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 DUSP16Q9BY84 665 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 DCLK3Q9C098 648 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 DNAI2Q9GZS0 605 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 GAREM1Q9H706 876 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 IL21RQ9HBE5 538 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 APOBEC3GQ9HC16 384 aaKnown RBP14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 ELOVL2Q9NXB9 296 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 APOBEC2Q9Y235 224 aaKnown RBP14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 NFE2L3Q9Y4A8 694 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 USP3Q9Y6I4 520 aa14.96□□□□□ -0.01
HLA-DQB2-229ENST00000411527 PTPRBP23467 1997 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 METTL12A8MUP2 240 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 BCAT2O15382 392 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ACTN4O43707 911 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CBFA2T3O75081 653 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CILPO75339 1184 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ACADMP11310 421 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CORO1AP31146 461 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 GCLMP48507 274 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ZNF234Q14588 700 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ACAP1Q15027 740 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 C19orf48Q6RUI8 117 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CCNI2Q6ZMN8 369 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 DENND1CQ8IV53 801 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TAS1R2Q8TE23 839 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PIWIL1Q96J94 861 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 EIF2B4Q9UI10 523 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PCOLCE2Q9UKZ9 415 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 AGO1Q9UL18 857 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CLEC4EQ9ULY5 219 aa14.95□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CALUO43852 315 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CYBBP04839 570 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 EPHX1P07099 455 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TRIM49P0CI25 452 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TRIM49CP0CI26 452 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ZSCAN22P10073 491 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 MATKP42679 507 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 COPAP53621 1224 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PPP3CAQ08209 521 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 E2F5Q15329 346 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ZNF394Q53GI3 561 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ANKS1BQ7Z6G8 1248 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 GLRX5Q86SX6 157 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CACUL1Q86Y37 369 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CCDC150Q8NCX0 1101 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 DDI1Q8WTU0 396 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 HEXIM2Q96MH2 286 aaKnown RBP14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 NUP58Q9BVL2 599 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CIPCQ9C0C6 399 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 NIF3L1Q9GZT8 377 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CCDC86Q9H6F5 360 aaKnown RBP14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 MMRN2Q9H8L6 949 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TM7SF3Q9NS93 570 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 MARCH2Q9P0N8 246 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TRAF3IP3Q9Y228 551 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 GPSM3Q9Y4H4 160 aa14.94□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CKAP5Q14008 2032 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 SLC12A8A0AV02 714 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 MAPK13O15264 365 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CER1O95813 267 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 F13A1P00488 732 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CENPBP07199 599 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ZNF883P0CG24 379 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 KRT13P13646 458 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 PRKCHP24723 683 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 BNC1Q01954 994 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ARID5AQ03989 594 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 EIF4HQ15056 248 aaKnown RBP14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 HLA-BQ31612 363 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 IL27RAQ6UWB1 636 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 SERPINA13PQ6UXR4 307 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 RSRC2Q7L4I2 434 aaKnown RBP14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 FAM124AQ86V42 546 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CPXM2Q8N436 756 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 SORCS1Q8WY21 1168 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 SLC2A11Q9BYW1 496 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 STRIP2Q9ULQ0 834 aa14.93□□□□□ -0.02
HLA-DQB2-229ENST00000411527 DSPP15924 2871 aaKnown RBP14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TIMM44O43615 452 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 IGLV3-19P01714 112 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 NR2F2P24468 414 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 YWHAGP61981 247 aaKnown RBP eCLIP14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 TMEM215Q68D42 235 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ATL3Q6DD88 541 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 INTS8Q75QN2 995 aaKnown RBP14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 ARHGAP18Q8N392 663 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 RBBP8NLQ8NC74 664 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 MDM1Q8TC05 714 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 RHBDD1Q8TEB9 315 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 SNX19Q92543 992 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 KIAA1522Q9P206 1035 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 RCOR1Q9UKL0 485 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 CFAP45Q9UL16 551 aa14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 FNDC3AQ9Y2H6 1198 aaKnown RBP14.92□□□□□ -0.02
HLA-DQB2-229ENST00000411527 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
HLA-DQB2-229ENST00000411527 A0A1B0GVT2 93 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms