RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 GRXCR1A8MXD5 290 aa20■□□□□ 0.79
LMO2-203ENST00000411482 NRP1O14786 923 aa20■□□□□ 0.79
LMO2-203ENST00000411482 TSHRP16473 764 aa20■□□□□ 0.79
LMO2-203ENST00000411482 ATXN1P54253 815 aaKnown RBP20■□□□□ 0.79
LMO2-203ENST00000411482 IFI35P80217 286 aaPredicted RBP20■□□□□ 0.79
LMO2-203ENST00000411482 GUCY1A3Q02108 690 aa20■□□□□ 0.79
LMO2-203ENST00000411482 PM20D1Q6GTS8 502 aa20■□□□□ 0.79
LMO2-203ENST00000411482 BEND5Q7L4P6 421 aa20■□□□□ 0.79
LMO2-203ENST00000411482 BHLHA9Q7RTU4 235 aa20■□□□□ 0.79
LMO2-203ENST00000411482 TDRPQ86YL5 185 aa20■□□□□ 0.79
LMO2-203ENST00000411482 UHMK1Q8TAS1 419 aaKnown RBP20■□□□□ 0.79
LMO2-203ENST00000411482 NTAN1Q96AB6 310 aa20■□□□□ 0.79
LMO2-203ENST00000411482 ULBP1Q9BZM6 244 aa20■□□□□ 0.79
LMO2-203ENST00000411482 DHX35Q9H5Z1 703 aaKnown RBP20■□□□□ 0.79
LMO2-203ENST00000411482 PPCSQ9HAB8 311 aa20■□□□□ 0.79
LMO2-203ENST00000411482 DNAJC17Q9NVM6 304 aaKnown RBP20■□□□□ 0.79
LMO2-203ENST00000411482 SLC4A7Q9Y6M7 1214 aa20■□□□□ 0.79
LMO2-203ENST00000411482 E7EVH7 732 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 SOX1O00570 391 aaPredicted RBP19.99■□□□□ 0.79
LMO2-203ENST00000411482 EFCAB14O75071 495 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 SULT1E1P49888 294 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 CACNA2D1P54289 1103 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 SCAPQ12770 1279 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 MAPRE1Q15691 268 aaKnown RBP19.99■□□□□ 0.79
LMO2-203ENST00000411482 DCAF6Q58WW2 860 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 C1orf228Q6PIY5 440 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 TMCO2Q7Z6W1 182 aaPredicted RBP19.99■□□□□ 0.79
LMO2-203ENST00000411482 RIBC1Q8N443 379 aaPredicted RBP19.99■□□□□ 0.79
LMO2-203ENST00000411482 RNF169Q8NCN4 708 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 NDRG1Q92597 394 aaKnown RBP19.99■□□□□ 0.79
LMO2-203ENST00000411482 FAM149B1Q96BN6 582 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 C9orf72Q96LT7 481 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 EPN3Q9H201 632 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 CWC15Q9P013 229 aaKnown RBP19.99■□□□□ 0.79
LMO2-203ENST00000411482 PAK5Q9P286 719 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 PCDHB8Q9UN66 801 aa19.99■□□□□ 0.79
LMO2-203ENST00000411482 SF3B1O75533 1304 aaKnown RBP eCLIP19.98■□□□□ 0.791e-7■■■■■ 51.7
LMO2-203ENST00000411482 A0A087WUV0 522 aaPredicted RBP19.98■□□□□ 0.79
LMO2-203ENST00000411482 H7C0C1 242 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 BRCC3P46736 316 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 ATP5OP48047 213 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 ARL4CP56559 192 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 KCNJ11Q14654 390 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 HIF1AQ16665 826 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 SYPL2Q5VXT5 272 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 ANKRD22Q5VYY1 191 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 GLB1LQ6UWU2 654 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 HFE2Q6ZVN8 426 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 ZC3H18Q86VM9 953 aaKnown RBP19.98■□□□□ 0.79
LMO2-203ENST00000411482 PHOSPHO2Q8TCD6 241 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 MYLPFQ96A32 169 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 KCNK16Q96T55 309 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 FTHL17Q9BXU8 183 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 FRMD8Q9BZ67 464 aaPredicted RBP19.98■□□□□ 0.79
LMO2-203ENST00000411482 MTIF3Q9H2K0 278 aaKnown RBP19.98■□□□□ 0.79
LMO2-203ENST00000411482 FETUBQ9UGM5 382 aa19.98■□□□□ 0.79
LMO2-203ENST00000411482 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 YJEFN3A6XGL0 299 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 E7ENQ6 273 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 CHADO15335 359 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 CDH16O75309 829 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 ZBED1O96006 694 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 ATP5DP30049 168 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 CDR1P51861 262 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 HNRNPH2P55795 449 aaKnown RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 PITX1P78337 314 aaPredicted RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 LONRF1Q17RB8 773 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 PPP6R3Q5H9R7 873 aaPredicted RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 GPRIN1Q7Z2K8 1008 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 CDKL3Q8IVW4 592 aaPredicted RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 THEM5Q8N1Q8 247 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 TOP1MTQ969P6 601 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 OLFM3Q96PB7 478 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 KANSL3Q9P2N6 904 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 ACTL7BQ9Y614 415 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 SZT2Q5T011 3432 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 MYO9BQ13459 2157 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 HACD1B0YJ81 288 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 GCATO75600 419 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 DGKIO75912 1065 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 ATP2A2P16615 1042 aaKnown RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 HCAR3P49019 387 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 SLC10A2Q12908 348 aaPredicted RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 SLC45A4Q5BKX6 768 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 CLLU1OSQ5K130 101 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 OVOS1Q6IE37 1185 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 BZW1Q7L1Q6 419 aaKnown RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 TAOK1Q7L7X3 1001 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 EXOC3L1Q86VI1 746 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 FAM131BQ86XD5 332 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 QKIQ96PU8 341 aaKnown RBP eCLIP19.97■□□□□ 0.79
LMO2-203ENST00000411482 MAGEB5Q9BZ81 275 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 ELAC1Q9H777 363 aaKnown RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 WDR6Q9NNW5 1121 aaKnown RBP19.97■□□□□ 0.79
LMO2-203ENST00000411482 PRDM4Q9UKN5 801 aa19.97■□□□□ 0.79
LMO2-203ENST00000411482 C5orf60A6NFR6 353 aa19.96■□□□□ 0.79
LMO2-203ENST00000411482 I3L4J1 428 aa19.96■□□□□ 0.79
LMO2-203ENST00000411482 M0QYT0 321 aa19.96■□□□□ 0.79
LMO2-203ENST00000411482 TRAPPC3O43617 180 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms