RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 POLR1BQ9H9Y6 1135 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 CTNNAL1Q9UBT7 734 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 PNPLA7Q6ZV29 1317 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 PDHXO00330 501 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 LHX1P48742 406 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 LY6KQ17RY6 165 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 WLSQ5T9L3 541 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 RTL3Q8N8U3 475 aaKnown RBP11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 SLITRK2Q9H156 845 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 KCNH7Q9NS40 1196 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 TMEM191CA6NGB0 347 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 ALX1Q15699 326 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 DDR2Q16832 855 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 KLHL17Q6TDP4 642 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 TBC1D23Q9NUY8 699 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 SNTG2Q9NY99 539 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 LOC100653049A0A140TA62 436 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 KRT34O76011 436 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 RHOBTB3O94955 611 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 TAL1P17542 331 aaPredicted RBP11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 SPATA21Q7Z572 469 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 STRA8Q7Z7C7 330 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 C9orf72Q96LT7 481 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 MANSC1Q9H8J5 431 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 ACTR8Q9H981 624 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 UNC13BO14795 1591 aa11.52□□□□□ -0.57
PRPF40A-202ENST00000410080 MYH1P12882 1939 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 MYH4Q9Y623 1939 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 NR6A1Q15406 480 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 PEG10Q86TG7 708 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 PHF21BQ96EK2 531 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 KCTD14Q9BQ13 255 aaPredicted RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 DDX43Q9NXZ2 648 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 TECPR2O15040 1411 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 SLC2A4P14672 509 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 PRKAG1P54619 331 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 RHAGQ02094 409 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 DSELQ8IZU8 1212 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 CORO1BQ9BR76 489 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 VCPKMTQ9H867 229 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 SETD4Q9NVD3 440 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 GSAPA4D1B5 854 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 GTPBP1O00178 669 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 SLC16A3O15427 465 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 TLL1O43897 1013 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 SNRPAP09012 282 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 HPCAL1P37235 193 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 NUP107P57740 925 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 ARMCX4Q5H9R4 360 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 PMM1Q92871 262 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 TBX3O15119 743 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 GHRP10912 638 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 FDFT1P37268 417 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 SMU1Q2TAY7 513 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 PDZK1Q5T2W1 519 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 STYK1Q6J9G0 422 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 LPCAT1Q8NF37 534 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 OR10G6Q8NH81 332 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 TUBGCP4Q9UGJ1 667 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 SCAMP3O14828 347 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 SERPINB8P50452 374 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 CCDC144BQ3MJ40 725 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 DEFB132Q7Z7B7 95 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 NRSN1Q8IZ57 195 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 ZCCHC2Q9C0B9 1178 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 NIF3L1Q9GZT8 377 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 ILKAPQ9H0C8 392 aaPredicted RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 CYLDQ9NQC7 956 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF624Q9P2J8 865 aaPredicted RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF112Q9UJU3 913 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 IL1BP01584 269 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 DNAL1Q4LDG9 190 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 MYPNQ86TC9 1320 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 FAM228AQ86W67 206 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 ATP6V1G3Q96LB4 118 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 BPIFA3Q9BQP9 254 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 XPNPEP3Q9NQH7 507 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF232Q9UNY5 417 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 TSC22D4Q9Y3Q8 395 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 NINQ8N4C6 2090 aa11.51□□□□□ -0.57
PRPF40A-202ENST00000410080 HOXC12P31275 282 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 BCAT1P54687 386 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 KCNT1Q5JUK3 1230 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 CHPFQ8IZ52 775 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 MADDQ8WXG6 1647 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 TYMPP19971 482 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 S100GP29377 79 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 ADIGQ0VDE8 80 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 SCRN3Q0VDG4 424 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 NFYCQ13952 458 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 JAMLQ86YT9 394 aa11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 ZNF655Q8N720 491 aaPredicted RBP11.5□□□□□ -0.57
PRPF40A-202ENST00000410080 SPPL2AQ8TCT8 520 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms