RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 NRDE2Q9H7Z3 1164 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 PICK1Q9NRD5 415 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 BTBD7Q9P203 1132 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 HESX1Q9UBX0 185 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 PPM1HQ9ULR3 514 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 C2CD2Q9Y426 696 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 NME7Q9Y5B8 376 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 CITO14578 2027 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 EVPLQ92817 2033 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 SPECC1L-ADORA2AF8WAN1 911 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 PRPSAP2O60256 369 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 FKBP6O75344 327 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 DGKIO75912 1065 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 ITGB3P05106 788 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 LYNP07948 512 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 CPA2P48052 419 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 NUMBP49757 651 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 PDE1BQ01064 536 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 GRM2Q14416 872 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 LY6KQ17RY6 165 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 SLC10A6Q3KNW5 377 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 SLC30A9Q6PML9 568 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 SESTD1Q86VW0 696 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 CRLF3Q8IUI8 442 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 MAP7D3Q8IWC1 876 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 UBA3Q8TBC4 463 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 FAM172AQ8WUF8 416 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 CAMKK2Q96RR4 588 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 TSC22D3Q99576 134 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 RPF1Q9H9Y2 349 aaKnown RBP8.1□□□□□ -1.11
EPHA4-203ENST00000409938 PAPOLBQ9NRJ5 636 aaKnown RBP8.1□□□□□ -1.11
EPHA4-203ENST00000409938 DNAJC28Q9NX36 388 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 PDP2Q9P2J9 529 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 PPARGC1AQ9UBK2 798 aaKnown RBP8.1□□□□□ -1.11
EPHA4-203ENST00000409938 SCOCQ9UIL1 159 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 ITGA11Q9UKX5 1188 aa8.1□□□□□ -1.11
EPHA4-203ENST00000409938 COL4A4P53420 1690 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 ITM2AO43736 263 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 TOP3BO95985 862 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 GJB1P08034 283 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 STAG3L1P0CL83 205 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 GNAT1P11488 350 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PTPN9P43378 593 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 NR2C2P49116 596 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 BCAR1P56945 870 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 RPL26P61254 145 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 CDC16Q13042 620 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PCLAFQ15004 111 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 HSDL1Q3SXM5 330 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 CELF3Q5SZQ8 465 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 FAXCQ5TGI0 409 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 SAMD7Q7Z3H4 446 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PDSS2Q86YH6 399 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 CDKL3Q8IVW4 592 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 NDUFAF2Q8N183 169 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 SLC35F5Q8WV83 523 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 ARNTL2Q8WYA1 636 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PDGFDQ9GZP0 370 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 MIS12Q9H081 205 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PDZD7Q9H5P4 517 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 XAB2Q9HCS7 855 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 S100A14Q9HCY8 104 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 EIF2B3Q9NR50 452 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 TSPAN16Q9UKR8 245 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 SOX13Q9UN79 622 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 KAT6AQ92794 2004 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 APRTP07741 180 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 ADORA2AP29274 412 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PEX19P40855 299 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 HARS2P49590 506 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 CSRP3P50461 194 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 NDST1P52848 882 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 DSG1Q02413 1049 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 STX3Q13277 289 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 NAB1Q13506 487 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 CCNIQ14094 377 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PDE1CQ14123 709 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PMF1Q6P1K2 205 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 SLC7A14Q8TBB6 771 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PIWIL2Q8TC59 973 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 ACTRT2Q8TDY3 377 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 NLRP4Q96MN2 994 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 GCOM2Q9BZD3 368 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 SLC13A1Q9BZW2 595 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 IQCGQ9H095 443 aaKnown RBP8.09□□□□□ -1.11
EPHA4-203ENST00000409938 PCMTD2Q9NV79 361 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 BPTFQ12830 3046 aa8.09□□□□□ -1.11
EPHA4-203ENST00000409938 SCN1AP35498 2009 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 NFKBIEO00221 500 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 CASQ2O14958 399 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-203ENST00000409938 PLIN3O60664 434 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 C22orf31O95567 290 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 ZBED1O96006 694 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 PROCP04070 461 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 SCNN1AP37088 669 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 GRIA1P42261 906 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 SLC26A2P50443 739 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 RAB27AP51159 221 aa8.08□□□□□ -1.12
EPHA4-203ENST00000409938 AP2B1P63010 937 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms