RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 C8orf74Q6P047 294 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 GPRIN1Q7Z2K8 1008 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 PIGZQ86VD9 579 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 TMEM173Q86WV6 379 aaPredicted RBP11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 COLGALT2Q8IYK4 626 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 WDR60Q8WVS4 1066 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 NAF1Q96HR8 494 aaKnown RBP11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 RPGRIP1Q96KN7 1286 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 TNIP3Q96KP6 325 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 MED10Q9BTT4 135 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 KRT82Q9NSB4 513 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 ABCF3Q9NUQ8 709 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 GOLGA6L10A0A0M3HER8 536 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 SKIP12755 728 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 KRT10P13645 584 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 ATXN1P54253 815 aaKnown RBP11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 SH3BGRP55822 239 aaPredicted RBP11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 BST2Q10589 180 aaKnown RBP11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 ZNF268Q14587 947 aaPredicted RBP11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 FAM182AQ5T1J6 154 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 NEPROQ6NW34 567 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 FBXO46Q6PJ61 603 aaPredicted RBP11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 CLEC20AQ6ZU45 233 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 LMNTD2Q8IXW0 634 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 ESX1Q8N693 406 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 STKLD1Q8NE28 680 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 AGAP11Q8TF27 550 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 RXFP2Q8WXD0 754 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 ATG4AQ8WYN0 398 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 RAPGEF5Q92565 580 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 CCT7Q99832 543 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 TMEM161AQ9NX61 479 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 RNF14Q9UBS8 474 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 PCDHB7Q9Y5E2 793 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 TSC2P49815 1807 aa11.13□□□□□ -0.63
LRRTM4-204ENST00000409884 HNRNPRO43390 633 aaKnown RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 HSPA1AP0DMV8 641 aaKnown RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 HSPA1BP0DMV9 641 aaKnown RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 RARAP10276 462 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 RALAP11233 206 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SP100P23497 879 aaPredicted RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SLC1A1P43005 524 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 KCNJ1P48048 391 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 BCAT1P54687 386 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 TUBA1BP68363 451 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ADIGQ0VDE8 80 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SIX1Q15475 284 aaPredicted RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 TAF11Q15544 211 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ANKRD20A2Q5SQ80 823 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ANKRD20A1Q5TYW2 823 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ANKRD20A3Q5VUR7 823 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 KAZNQ674X7 775 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 TTC27Q6P3X3 843 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 TUBA1AQ71U36 451 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 DDX42Q86XP3 938 aaKnown RBP eCLIP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 RHOT1Q8IXI2 618 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 PRELID2Q8N945 189 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ZMIZ2Q8NF64 920 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 C1orf54Q8WWF1 131 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SEPT8Q92599 483 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 IFT43Q96FT9 208 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 CASD1Q96PB1 797 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SMC6Q96SB8 1091 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 HNRNPABQ99729 332 aaKnown RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 FTHL17Q9BXU8 183 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 MAGEB5Q9BZ81 275 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ZNF304Q9HCX3 659 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 UBN1Q9NPG3 1134 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 KIAA1522Q9P206 1035 aaPredicted RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SLC4A7Q9Y6M7 1214 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 EIF4E1BA6NMX2 242 aaKnown RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ALDH2P05091 517 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 CD48P09326 243 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ODC1P11926 461 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 PDGFRAP16234 1089 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 PITX1P78337 314 aaPredicted RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 GUCY2DQ02846 1103 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SPRED3Q2MJR0 410 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SEL1L2Q5TEA6 688 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 RNF220Q5VTB9 566 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 HIBCHQ6NVY1 386 aaPredicted RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 PPP1R2P3Q6NXS1 205 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 DCLRE1AQ6PJP8 1040 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SLC13A5Q86YT5 568 aaPredicted RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 PLPP6Q8IY26 295 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 ABI1Q8IZP0 508 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 P3H4Q92791 437 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 PEBP4Q96S96 227 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 CGREF1Q99674 301 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 SMOQ99835 787 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 TRIM51Q9BSJ1 452 aa11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 PRDM5Q9NQX1 630 aaPredicted RBP11.12□□□□□ -0.63
LRRTM4-204ENST00000409884 TMEM39AQ9NV64 488 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms