RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 NME3Q13232 169 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 C15orf59Q2T9L4 293 aaPredicted RBP17.3■□□□□ 0.36
SUMO1-208ENST00000409627 RIN3Q8TB24 985 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 BPIFB1Q8TDL5 484 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 DEPDC1BQ8WUY9 529 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 FCRL2Q96LA5 508 aaPredicted RBP17.3■□□□□ 0.36
SUMO1-208ENST00000409627 ZNF830Q96NB3 372 aaPredicted RBP17.3■□□□□ 0.36
SUMO1-208ENST00000409627 TRIM7Q9C029 511 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 OSGEPQ9NPF4 335 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 PIGVQ9NUD9 493 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 CFAP97Q9P2B7 532 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 IGSF9Q9P2J2 1179 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 IP6K2Q9UHH9 426 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 LSM7Q9UK45 103 aaKnown RBP17.3■□□□□ 0.36
SUMO1-208ENST00000409627 TFR2Q9UP52 801 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 SH3BP1Q9Y3L3 701 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 NUMBLQ9Y6R0 609 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 COL6A3P12111 3177 aa17.3■□□□□ 0.36
SUMO1-208ENST00000409627 C5orf42Q9H799 3197 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 E2F8A0AVK6 867 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 C19orf67A6NJJ6 358 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 MYO1FO00160 1098 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 GREM1O60565 184 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 HMBSP08397 361 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 IRF1P10914 325 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 SLC2A3P11169 496 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 CXCR3P49682 368 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 FCHO2Q0JRZ9 810 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 PIGHQ14442 188 aaPredicted RBP17.29■□□□□ 0.36
SUMO1-208ENST00000409627 PPP2R5DQ14738 602 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 ACAP1Q15027 740 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 CDO1Q16878 200 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 NUGGCQ68CJ6 796 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 VITQ6UXI7 678 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 HTR3DQ70Z44 454 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 SND1Q7KZF4 910 aaKnown RBP eCLIP17.29■□□□□ 0.36
SUMO1-208ENST00000409627 MFSD6LQ8IWD5 586 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 UNC45BQ8IWX7 931 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 FAM172AQ8WUF8 416 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 WBP2Q969T9 261 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 CALR3Q96L12 384 aaKnown RBP17.29■□□□□ 0.36
SUMO1-208ENST00000409627 LRRC3BQ96PB8 259 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 KXD1Q9BQD3 176 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 DCLK3Q9C098 648 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 LACRTQ9GZZ8 138 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.29■□□□□ 0.367e-6■■■■□ 21.9
SUMO1-208ENST00000409627 LIMD1Q9UGP4 676 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 PAXBP1Q9Y5B6 917 aa17.29■□□□□ 0.36
SUMO1-208ENST00000409627 SYNJ2BP-COX16A0A087WUM0 186 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 LATS1O95835 1130 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 APOEP02649 317 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 PSMC3P17980 439 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 CORO1AP31146 461 aaKnown RBP17.28■□□□□ 0.36
SUMO1-208ENST00000409627 CCR1P32246 355 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 ARHGAP25P42331 645 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 HARS2P49590 506 aaKnown RBP17.28■□□□□ 0.36
SUMO1-208ENST00000409627 HDAC4P56524 1084 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 KIF5AQ12840 1032 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 MTA1Q13330 715 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 BRMS1LQ5PSV4 323 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 SH3PXD2AQ5TCZ1 1133 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 Q6ZNB5 142 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 ZNF662Q6ZS27 426 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.28■□□□□ 0.36
SUMO1-208ENST00000409627 ST13P5Q8NFI4 369 aaPredicted RBP17.28■□□□□ 0.36
SUMO1-208ENST00000409627 AZIN2Q96A70 460 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 NCAPGQ9BPX3 1015 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 PLA2G2FQ9BZM2 168 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 TSGA10Q9BZW7 698 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 KCNK12Q9HB15 430 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 COX16Q9P0S2 106 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 ZNF510Q9Y2H8 683 aa17.28■□□□□ 0.36
SUMO1-208ENST00000409627 KCNU1A8MYU2 1149 aa17.27■□□□□ 0.36
SUMO1-208ENST00000409627 RNF8O76064 485 aa17.27■□□□□ 0.36
SUMO1-208ENST00000409627 KLKB1P03952 638 aa17.27■□□□□ 0.36
SUMO1-208ENST00000409627 ATXN1P54253 815 aaKnown RBP17.27■□□□□ 0.36
SUMO1-208ENST00000409627 ZC3H12AQ5D1E8 599 aaKnown RBP17.27■□□□□ 0.36
SUMO1-208ENST00000409627 TTC16Q8NEE8 873 aa17.27■□□□□ 0.36
SUMO1-208ENST00000409627 RNF34Q969K3 372 aa17.27■□□□□ 0.36
SUMO1-208ENST00000409627 RPP25Q9BUL9 199 aaKnown RBP17.27■□□□□ 0.36
SUMO1-208ENST00000409627 THG1LQ9NWX6 298 aaKnown RBP17.27■□□□□ 0.36
SUMO1-208ENST00000409627 ARHGEF38Q9NXL2 777 aa17.27■□□□□ 0.36
SUMO1-208ENST00000409627 TBC1D14Q9P2M4 693 aa17.27■□□□□ 0.36
SUMO1-208ENST00000409627 A0A0U1RQJ8 604 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 SLC9A3R1O14745 358 aaPredicted RBP17.26■□□□□ 0.35
SUMO1-208ENST00000409627 PROSCO94903 275 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 MAN1A1P33908 653 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 PCK1P35558 622 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 NOP2P46087 812 aaKnown RBP17.26■□□□□ 0.35
SUMO1-208ENST00000409627 ARHGAP29Q52LW3 1261 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 RAB6CQ53S08 254 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 TJAP1Q5JTD0 557 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 CC2D1AQ6P1N0 951 aaPredicted RBP17.26■□□□□ 0.35
SUMO1-208ENST00000409627 FAM131BQ86XD5 332 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 YAF2Q8IY57 180 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 ARFGAP1Q8N6T3 406 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 ATP6V0D2Q8N8Y2 350 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 OSCP1Q8WVF1 389 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms