RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 KIAA1958Q8N8K9 716 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 ANKRD36BP1Q96IX9 119 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 MMS19Q96T76 1030 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 ACOX2Q99424 681 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 TSG101Q99816 390 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 ZNF518BQ9C0D4 1074 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 SLC39A2Q9NP94 309 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 CALCOCO1Q9P1Z2 691 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 CDC23Q9UJX2 597 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 PLXNB3Q9ULL4 1909 aa13.4□□□□□ -0.26
CHRNA1-205ENST00000409542 CELSR3Q9NYQ7 3312 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 IGHV1OR15-9A0A0B4J2B8 117 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 A0A1W2PQF6 199 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 FRMD3A2A2Y4 597 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 CTAGE9A4FU28 777 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 TBC1D3BA6NDS4 549 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 PES1O00541 588 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 SLC9A3R1O14745 358 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 COCHO43405 550 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 OPHN1O60890 802 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 TULP3O75386 442 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 ADH1CP00326 375 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 IDEP14735 1019 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 GNL1P36915 607 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 PGFP49763 221 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 ATXN3P54252 364 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 ZNF569Q5MCW4 686 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 TDRD10Q5VZ19 366 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 PROSER1Q86XN7 944 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 TMEM25Q86YD3 366 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 BBS7Q8IWZ6 715 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 CCDC170Q8IYT3 715 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 HDDC3Q8N4P3 179 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 ZNF513Q8N8E2 541 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 PNPLA1Q8N8W4 532 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 GOLGA1Q92805 767 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 CEP295NLQ96MC4 621 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 B3GNT5Q9BYG0 378 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 SLC6A17Q9H1V8 727 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 CD248Q9HCU0 757 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 OLFML3Q9NRN5 406 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 ZNHIT6Q9NWK9 470 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 CHORDC1Q9UHD1 332 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 PCDHB13Q9Y5F0 798 aa13.39□□□□□ -0.27
CHRNA1-205ENST00000409542 ARHGAP33O14559 1287 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 SH3BP5O60239 455 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 GJB3O75712 270 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 PTPN1P18031 435 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 HNRNPH3P31942 346 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 HOXD13P35453 343 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 CYLC1P35663 651 aaPredicted RBP13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 PPP3CCP48454 512 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 KRT83P78385 493 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 CBX1P83916 185 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 GAD2Q05329 585 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 SCAPQ12770 1279 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 BYSLQ13895 437 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 MAN2A1Q16706 1144 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 VWA3BQ502W6 1294 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 EGFLAMQ63HQ2 1017 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 WDR59Q6PJI9 974 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 TRAPPC11Q7Z392 1133 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 SLC35F6Q8N357 371 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 OR6B3Q8NGW1 331 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 CEP76Q8TAP6 659 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 KCNK16Q96T55 309 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 CHP1Q99653 195 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 NAPGQ99747 312 aaPredicted RBP13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 CCSER2Q9H7U1 834 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 PANK4Q9NVE7 773 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 REXO2Q9Y3B8 237 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 GPSM3Q9Y4H4 160 aa13.38□□□□□ -0.27
CHRNA1-205ENST00000409542 A0A0U1RQJ8 604 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 E2F8A0AVK6 867 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 ATP8B1O43520 1251 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 TNNC2P02585 160 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 HOXB2P14652 356 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 NDUFV2P19404 249 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 TRIM21P19474 475 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 HOXD12P35452 270 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 CLCN6P51797 869 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 WHAMMP3Q1A5X7 153 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 DUOXA2Q1HG44 320 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 SOWAHCQ53LP3 525 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 C10orf76Q5T2E6 689 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 CCDC65Q8IXS2 484 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 KRT222Q8N1A0 295 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 FBXO32Q969P5 355 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 SLITRK1Q96PX8 696 aa13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 SMG1Q96Q15 3661 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-205ENST00000409542 IRX2Q9BZI1 471 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms