RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 AGPAT3Q9NRZ7 376 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 TM7SF3Q9NS93 570 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 CACNA2D2Q9NY47 1150 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 DNMT3LQ9UJW3 386 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 FBXO2Q9UK22 296 aaPredicted RBP8.16□□□□□ -1.1
LSM5-202ENST00000409292 STRIP2Q9ULQ0 834 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 GPSM3Q9Y4H4 160 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 PCDHGB2Q9Y5G2 931 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 PCDHA5Q9Y5H7 936 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 STON1Q9Y6Q2 735 aa8.16□□□□□ -1.1
LSM5-202ENST00000409292 PLXND1Q9Y4D7 1925 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 PTPRJQ12913 1337 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 E9PAM4 449 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 DFNA5O60443 496 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 CST3P01034 146 aaPredicted RBP8.15□□□□□ -1.1
LSM5-202ENST00000409292 RPN1P04843 607 aaKnown RBP8.15□□□□□ -1.1
LSM5-202ENST00000409292 CDK4P11802 303 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 AFF3P51826 1226 aaKnown RBP8.15□□□□□ -1.1
LSM5-202ENST00000409292 MAP3K7CLP57077 242 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 MYL6P60660 151 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 FAM193AP78312 1265 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 ORC1Q13415 861 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 NCOA4Q13772 614 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 SGSM1Q2NKQ1 1148 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 C10orf120Q5SQS8 335 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 DCAF12L1Q5VU92 463 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 KLHDC10Q6PID8 442 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 LRRC69Q6ZNQ3 347 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 USP49Q70CQ1 688 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 VASH1Q7L8A9 365 aaPredicted RBP8.15□□□□□ -1.1
LSM5-202ENST00000409292 ADAT2Q7Z6V5 191 aaKnown RBP8.15□□□□□ -1.1
LSM5-202ENST00000409292 UNC93AQ86WB7 457 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 TMPRSS6Q8IU80 811 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 SFTPA1Q8IWL2 248 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 ARHGAP18Q8N392 663 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 PNPLA1Q8N8W4 532 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 OR2I1PQ8NGU4 316 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 SCAMP5Q8TAC9 235 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 ZNF507Q8TCN5 953 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 HNRNPLLQ8WVV9 542 aaKnown RBP8.15□□□□□ -1.1
LSM5-202ENST00000409292 DNASE2BQ8WZ79 361 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 SNX19Q92543 992 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 CAMK1GQ96NX5 476 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 CLIC6Q96NY7 704 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 KCNK16Q96T55 309 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 FAM117AQ9C073 453 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 DPEP3Q9H4B8 488 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 ZSCAN16Q9H4T2 348 aaPredicted RBP8.15□□□□□ -1.1
LSM5-202ENST00000409292 MAGEF1Q9HAY2 307 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 CYLDQ9NQC7 956 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 ITM2CQ9NQX7 267 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 PCOLCE2Q9UKZ9 415 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 RAD54BQ9Y620 910 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 CLIC4Q9Y696 253 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 ACACAQ13085 2346 aa8.15□□□□□ -1.1
LSM5-202ENST00000409292 MYOFQ9NZM1 2061 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 FAM92AA1XBS5 289 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 METTL12A8MUP2 240 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 CLIC2O15247 247 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 CILPO75339 1184 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 KIF20AO95235 890 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 ZDHHC11BP0C7U3 371 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 RARGP13631 454 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 MAOBP27338 520 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 HNF1BP35680 557 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 GRK6P43250 576 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 CACNA2D1P54289 1103 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 C19orf57Q0VDD7 668 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 MESP2Q0VG99 397 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 SLC39A14Q15043 492 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 BMT2Q1RMZ1 405 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 FUT11Q495W5 492 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 TTC31Q49AM3 519 aaPredicted RBP8.14□□□□□ -1.11
LSM5-202ENST00000409292 SERPINA13PQ6UXR4 307 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 SCARA5Q6ZMJ2 495 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 RSRC2Q7L4I2 434 aaKnown RBP8.14□□□□□ -1.11
LSM5-202ENST00000409292 TMPRSS7Q7RTY8 843 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 ANKS1BQ7Z6G8 1248 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 ACOT1Q86TX2 421 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 NELFCDQ8IXH7 590 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 ZNF557Q8N988 423 aaPredicted RBP8.14□□□□□ -1.11
LSM5-202ENST00000409292 GLIS3Q8NEA6 775 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 SLC2A14Q8TDB8 520 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 BHMTQ93088 406 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 LRIG1Q96JA1 1093 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 FAM84AQ96KN4 292 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 ZNF396Q96N95 335 aaPredicted RBP8.14□□□□□ -1.11
LSM5-202ENST00000409292 ACOX2Q99424 681 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 SLC2A11Q9BYW1 496 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 CIPCQ9C0C6 399 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 VRTNQ9H8Y1 702 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 FBRSQ9HAH7 460 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 PNPLA8Q9NP80 782 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 WSB2Q9NYS7 404 aaPredicted RBP8.14□□□□□ -1.11
LSM5-202ENST00000409292 IL37Q9NZH6 218 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 TFIP11Q9UBB9 837 aaKnown RBP8.14□□□□□ -1.11
LSM5-202ENST00000409292 DKK4Q9UBT3 224 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 FKBPLQ9UIM3 349 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 NAGPAQ9UK23 515 aa8.14□□□□□ -1.11
LSM5-202ENST00000409292 PLA2G4CQ9UP65 541 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms