RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 LRRC20Q8TCA0 184 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 VPS33AQ96AX1 596 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ACAT2Q9BWD1 397 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 NEK6Q9HC98 313 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 EBF1Q9UH73 591 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 CDYLQ9Y232 598 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 HEMK1Q9Y5R4 338 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 NOX1Q9Y5S8 564 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 KAT6BQ8WYB5 2073 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 BAZ2BQ9UIF8 2168 aaKnown RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 HEATR9A2RTY3 570 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 TSPAN4O14817 238 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ALOX15BO15296 676 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 SERPINE1P05121 402 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 OSBPP22059 807 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 VAMP7P51809 220 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 HNRNPFP52597 415 aaKnown RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ARPP19P56211 112 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 GTF2IP78347 998 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 LAMC2Q13753 1193 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 SEC23AQ15436 765 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 KIF19Q2TAC6 998 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 DCAF12L1Q5VU92 463 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 IQSEC1Q6DN90 963 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 PODNQ7Z5L7 613 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 PTAR1Q7Z6K3 402 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 CCNYL1Q8N7R7 359 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 BEST2Q8NFU1 509 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ZNF420Q8TAQ5 688 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ACTRT2Q8TDY3 377 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 RAB2BQ8WUD1 216 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ASPSCR1Q9BZE9 553 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ACSS3Q9H6R3 686 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 GTSE1Q9NYZ3 720 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ERGIC3Q9Y282 383 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 FRMPD2Q68DX3 1309 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 LINC00854A0A1B0GVQ3 168 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 FAM172BPA6NC97 362 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 CCNT2O60583 730 aaKnown RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 GLRA3O75311 464 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 CLPXO76031 633 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 WDR47O94967 919 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 FUCA1P04066 466 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ZSCAN5DPP0CG00 497 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 RALBP11234 206 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 MAGP20916 626 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 CASP2P42575 452 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 EIF6P56537 245 aaKnown RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ARMC4Q5T2S8 1044 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 TAF2Q6P1X5 1199 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 CCDC60Q8IWA6 550 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 CLIP4Q8N3C7 705 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 HDAC2Q92769 488 aaKnown RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 PROX1Q92786 737 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 SLC35C1Q96A29 364 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 TMIGD2Q96BF3 282 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 TMEM121Q9BTD3 319 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 C6orf62Q9GZU0 229 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 ILKAPQ9H0C8 392 aaPredicted RBP9.32□□□□□ -0.92
PSEN1-205ENST00000406768 BLOC1S4Q9NUP1 217 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 FBXO28Q9NVF7 368 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 BAG5Q9UL15 447 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 KLHL20Q9Y2M5 609 aa9.32□□□□□ -0.92
PSEN1-205ENST00000406768 hCG_1984214I3L0E3 225 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 SNAP91O60641 907 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 CETPP11597 493 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 CD19P15391 556 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 POLR2BP30876 1174 aaKnown RBP9.31□□□□□ -0.92
PSEN1-205ENST00000406768 GPD2P43304 727 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 HSD17B4P51659 736 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 NKX2-5P52952 324 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-205ENST00000406768 NME5P56597 212 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 GSTO1P78417 241 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 HERC3Q15034 1050 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 ATAD3BQ5T9A4 648 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 NEPROQ6NW34 567 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 CRTC3Q6UUV7 619 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 IFNEQ86WN2 208 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 MED30Q96HR3 178 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 EYA3Q99504 573 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 EPS8L2Q9H6S3 715 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 COQ10BQ9H8M1 238 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 PCDHB4Q9Y5E5 795 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 NOS1APO75052 506 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-205ENST00000406768 ADAM23O75077 832 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 ATF3P18847 181 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 TAF12Q16514 161 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 UBE2SQ16763 222 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 PHKG1Q16816 387 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 UBAP2Q5T6F2 1119 aaKnown RBP9.31□□□□□ -0.92
PSEN1-205ENST00000406768 SDE2Q6IQ49 451 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 PAOXQ6QHF9 649 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 KCTD8Q6ZWB6 473 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 OR8H2Q8N162 312 aa9.31□□□□□ -0.92
PSEN1-205ENST00000406768 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.31□□□□□ -0.92
PSEN1-205ENST00000406768 CHPT1Q8WUD6 406 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms