RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 VRTNQ9H8Y1 702 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 EBF2Q9HAK2 575 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CYTH4Q9UIA0 394 aa16.53■□□□□ 0.24
CHRFAM7A-203ENST00000401522 CEP290O15078 2479 aa16.52■□□□□ 0.24
CHRFAM7A-203ENST00000401522 TNRC18O15417 2968 aaPredicted RBP16.52■□□□□ 0.24
CHRFAM7A-203ENST00000401522 APOC4-APOC2K7ER74 178 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 B4GALT3O60512 393 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 WFS1O76024 890 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 STAU1O95793 577 aaKnown RBP16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 APOC2P02655 101 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CCND1P24385 295 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GDF10P55107 478 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SPDYAQ5MJ70 313 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FNBP1LQ5T0N5 605 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 RFX6Q8HWS3 928 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 LRRC37BQ96QE4 947 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 YME1L1Q96TA2 773 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MAK16Q9BXY0 300 aaKnown RBP16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MYLK2Q9H1R3 596 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 LRMDAQ9H2I8 198 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 NRDE2Q9H7Z3 1164 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 METTL5Q9NRN9 209 aaKnown RBP16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GRID1Q9ULK0 1009 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 INSL6Q9Y581 213 aa16.52■□□□□ 0.23
CHRFAM7A-203ENST00000401522 A0A1W2PPM1 405 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CASTOR2A6NHX0 329 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MCF2LO15068 1137 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ERBB2P04626 1255 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 BMP8BP34820 402 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PNPLA4P41247 253 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 RAP1GAPP47736 663 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 EIF3EP60228 445 aaKnown RBP16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PAN2Q504Q3 1202 aaKnown RBP16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 KCNT1Q5JUK3 1230 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 VSIG1Q86XK7 387 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PDIK1LQ8N165 341 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 AGAP11Q8TF27 550 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SPOCK2Q92563 424 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 HPDLQ96IR7 371 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CPXM1Q96SM3 734 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PAFAH2Q99487 392 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 RAD9AQ99638 391 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PAAF1Q9BRP4 392 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ZBED2Q9BTP6 218 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SAE1Q9UBE0 346 aaPredicted RBP16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 DNAJB4Q9UDY4 337 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PPEF2O14830 753 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TM9SF1O15321 606 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 BANF1O75531 89 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 RNF8O76064 485 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 KRT4P19013 534 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GABRB2P47870 512 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ATP11AP98196 1134 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 BTG3Q14201 252 aaPredicted RBP16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PARP6Q2NL67 630 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MSS51Q4VC12 460 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 LVRNQ6Q4G3 990 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 C3orf62Q6ZUJ4 267 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PALM2Q8IXS6 379 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 AGGF1Q8N302 714 aaeCLIP16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FBXO36Q8NEA4 188 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ZNF398Q8TD17 642 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ZNF75CPQ92670 426 aaPredicted RBP16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MCRS1Q96EZ8 462 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TMEM175Q9BSA9 504 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CWH43Q9H720 699 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CYP3A43Q9HB55 503 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ETNK1Q9HBU6 452 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 NOP53Q9NZM5 478 aaKnown RBP16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CACNG4Q9UBN1 327 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TJP2Q9UDY2 1190 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CHKBQ9Y259 395 aa16.51■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 CAPN15O75808 1086 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TRUB2O95900 331 aaKnown RBP16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ALDH2P05091 517 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PAX3P23760 479 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MIPP30301 263 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SSTR1P30872 391 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ELF1P32519 619 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 PCK1P35558 622 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 LILRA4P59901 499 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 GAD2Q05329 585 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SEPT7Q16181 437 aaKnown RBP16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 FYB2Q5VWT5 728 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 UNC45BQ8IWX7 931 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SLC4A11Q8NBS3 891 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 C10orf82Q8WW14 230 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 INPP5DQ92835 1189 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ERP27Q96DN0 273 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 MRRFQ96E11 262 aaKnown RBP16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 STAMBPL1Q96FJ0 436 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ZNF560Q96MR9 790 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SDCBP2Q9H190 292 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 SLCO1B3Q9NPD5 702 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 ASNSD1Q9NWL6 643 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 XPO7Q9UIA9 1087 aaKnown RBP16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 TRIM33Q9UPN9 1127 aa16.5■□□□□ 0.23
CHRFAM7A-203ENST00000401522 STK38LQ9Y2H1 464 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms