RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 AQP5P55064 265 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 EFL1Q7Z2Z2 1120 aaKnown RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 AGO4Q9HCK5 861 aaKnown RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 VANGL2Q9ULK5 521 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 TRPC5OSA6NMA1 111 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 FGFR3P22607 806 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 FDFT1P37268 417 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 AASDHQ4L235 1098 aaPredicted RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 GLT6D1Q7Z4J2 308 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 RIT2Q99578 217 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 UBXN6Q9BZV1 441 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 RMND5AQ9H871 391 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 GPSM3Q9Y4H4 160 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 ZNF521Q96K83 1311 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 EIF3HO15372 352 aaKnown RBP eCLIP14.12□□□□□ -0.15
VAPA-202ENST00000400000 CTSEP14091 401 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 IL5RAQ01344 420 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 CNTN2Q02246 1040 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 CYP20A1Q6UW02 462 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 SLC13A5Q86YT5 568 aaPredicted RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 KIRREL3Q8IZU9 778 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 ADGRE3Q9BY15 652 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 SPATC1LQ9H0A9 340 aa14.12□□□□□ -0.15
VAPA-202ENST00000400000 KRCC1Q9NPI7 259 aaPredicted RBP14.12□□□□□ -0.15
VAPA-202ENST00000400000 TBC1D3BA6NDS4 549 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 SDR42E2A6NKP2 422 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 RCAN1P53805 252 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 BCAT1P54687 386 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 SDHAF4Q5VUM1 108 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 ZNF280DQ6N043 979 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 GTF3C2Q8WUA4 911 aaPredicted RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 ANKEF1Q9NU02 776 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 MRPL39Q9NYK5 338 aaKnown RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 SPG21Q9NZD8 308 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 TP73O15350 636 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 SLC2A3P11169 496 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 FDPSP14324 419 aaKnown RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 MGAT1P26572 445 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 TBX4P57082 545 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 HERVK_113P62684 666 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 C11orf88Q6PI97 169 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 FAM228AQ86W67 206 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 SPRTNQ9H040 489 aaPredicted RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 ATP13A1Q9HD20 1204 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 TCEA1P23193 301 aaKnown RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 WLSQ5T9L3 541 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 TRAPPC5Q8IUR0 188 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 DNAJC9Q8WXX5 260 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 OSBPL6Q9BZF3 934 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 FHDC1Q9C0D6 1143 aaPredicted RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 AMHP03971 560 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 VDRP11473 427 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 CYLC2Q14093 348 aaPredicted RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 ICE2Q659A1 982 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 DPP10Q8N608 796 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 APBA2Q99767 749 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 CTNNAL1Q9UBT7 734 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 CLTCL1P53675 1640 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 TBX3O15119 743 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 CRTAMO95727 393 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 GRK4P32298 578 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 CCT8P50990 548 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 CRADDP78560 199 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 CSTF3Q12996 717 aaKnown RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 TRIM71Q2Q1W2 868 aaKnown RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 MIIPQ5JXC2 388 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 TIGD7Q6NT04 549 aaPredicted RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 SPATA20Q8TB22 786 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 USP7Q93009 1102 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 THG1LQ9NWX6 298 aaKnown RBP14.11□□□□□ -0.15
VAPA-202ENST00000400000 BLOC1S6Q9UL45 172 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 SPATA31E1Q6ZUB1 1445 aa14.11□□□□□ -0.15
VAPA-202ENST00000400000 NAMPTP43490 491 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 HIRAP54198 1017 aaPredicted RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 PPP1R26Q5T8A7 1209 aaPredicted RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 HLA-DQA1Q5Y7H0 255 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 ZCCHC23Q6ZST2 131 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 OMDQ99983 421 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 EMILIN2Q9BXX0 1053 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 TSPAN16Q9UKR8 245 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 ADSLP30566 484 aaPredicted RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.151e-11■■□□□ 13.7
VAPA-202ENST00000400000 KCNMA1Q12791 1236 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 ZNF484Q5JVG2 852 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 PDPK2PQ6A1A2 396 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 PARGQ86W56 976 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 NAT16Q8N8M0 369 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 BBS4Q96RK4 519 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 CORO1BQ9BR76 489 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 HMX1Q9NP08 348 aaPredicted RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 ZNHIT2Q9UHR6 403 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 CENPCQ03188 943 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 PRKAA1Q13131 559 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 CLYBLQ8N0X4 340 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 SH3GL3Q99963 347 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 MTG1Q9BT17 334 aaPredicted RBP14.1□□□□□ -0.15
VAPA-202ENST00000400000 MTFR1LQ9H019 292 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 TSC22D4Q9Y3Q8 395 aa14.1□□□□□ -0.15
VAPA-202ENST00000400000 XRCC4Q13426 336 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms