RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 SUGP1Q8IWZ8 645 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 ELOA2Q8IYF1 753 aaPredicted RBP12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 C4orf33Q8N1A6 199 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 RERGLQ9H628 205 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 GALNT8Q9NY28 637 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 MED24O75448 989 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 TYMPP19971 482 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 S100A5P33763 92 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 SNRPD1P62314 119 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 SPIDRQ14159 915 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 CYP2A13Q16696 494 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 TUBGCP4Q9UGJ1 667 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 ENTPD4Q9Y227 616 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 KLHL20Q9Y2M5 609 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 RWDD3Q9Y3V2 267 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 RNF103O00237 685 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 KLHL2O95198 593 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 TMEM253P0C7T8 217 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 HDCP19113 662 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 SOX10P56693 466 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 MIIPQ5JXC2 388 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 ERMARDQ5T6L9 678 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 TMEM86AQ8N2M4 240 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 DPP10Q8N608 796 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 LRRC40Q9H9A6 602 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 SNX6Q9UNH7 406 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 TBL1XO60907 577 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 NDST1P52848 882 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 CHI3L2Q15782 390 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 HECTD3Q5T447 861 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 KLHDC7AQ5VTJ3 777 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 KRT77Q7Z794 578 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 RANBP17Q9H2T7 1088 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 GULP1Q9UBP9 304 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 CDC42BPAQ5VT25 1732 aa12.39□□□□□ -0.43
CACNA1C-213ENST00000399629 CEP170BQ9Y4F5 1589 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 GMNCA6NCL1 334 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 SDR42E2A6NKP2 422 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 PDE2AO00408 941 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 ZBTB39O15060 712 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 RAD51BO15315 384 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 PYGMP11217 842 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 VSNL1P62760 191 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 TEAD4Q15561 434 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 ARHGAP17Q68EM7 881 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CYP4Z2PQ8N1L4 340 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 POP1Q99575 1024 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 FRMD8Q9BZ67 464 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 SH3BP4Q9P0V3 963 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 ITGA8P53708 1063 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CYTH1Q15438 398 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 JAMLQ86YT9 394 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CHPFQ8IZ52 775 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 DAGLBQ8NCG7 672 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CAPNS2Q96L46 248 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 C9orf72Q96LT7 481 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 BLOC1S6Q9UL45 172 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 NDRG2Q9UN36 371 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 MRPS17Q9Y2R5 130 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 LACTBL1A8MY62 500 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CCDC130P13994 396 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 SCNN1GP51170 649 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 PTPN11Q06124 597 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 KYNUQ16719 465 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 RIOX2Q8IUF8 465 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 NRSN1Q8IZ57 195 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 APOL2Q9BQE5 337 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 PRRG3Q9BZD7 231 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 ZNF518BQ9C0D4 1074 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 LZTS1Q9Y250 596 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 RAD54BQ9Y620 910 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 MICAL2O94851 1124 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 TLX1P31314 330 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CASP4P49662 377 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 ZNHIT3Q15649 155 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 KCNT1Q5JUK3 1230 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 GATAD2AQ86YP4 633 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 SLAIN1Q8ND83 568 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 RNASE11Q8TAA1 199 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 GAD1Q99259 594 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 UBP1Q9NZI7 540 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CHORDC1Q9UHD1 332 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 TCP11X1B4DZS4 312 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 CYP4F12Q9HCS2 524 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 STOML1Q9UBI4 398 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 VTI1BQ9UEU0 232 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 KLHL3Q9UH77 587 aa12.38□□□□□ -0.43
CACNA1C-213ENST00000399629 GUCY1B2O75343 617 aa12.37□□□□□ -0.43
CACNA1C-213ENST00000399629 USP17L7P0C7H9 530 aa12.37□□□□□ -0.43
CACNA1C-213ENST00000399629 CYP2F1P24903 491 aa12.37□□□□□ -0.43
CACNA1C-213ENST00000399629 STK4Q13043 487 aa12.37□□□□□ -0.43
CACNA1C-213ENST00000399629 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
CACNA1C-213ENST00000399629 PANX3Q96QZ0 392 aa12.37□□□□□ -0.43
CACNA1C-213ENST00000399629 ABCC13Q9NSE7 274 aa12.37□□□□□ -0.43
CACNA1C-213ENST00000399629 NOP53Q9NZM5 478 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms