RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 ANP32AP39687 249 aaKnown RBP14.03□□□□□ -0.16
VCX3A-202ENST00000398729 DGKGP49619 791 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 BSPRYQ5W0U4 402 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 PSAPL1Q6NUJ1 521 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 BHLHA9Q7RTU4 235 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 DENND1CQ8IV53 801 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 SCML4Q8N228 414 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 BHMTQ93088 406 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 PLD4Q96BZ4 506 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 INTS2Q9H0H0 1204 aaKnown RBP14.03□□□□□ -0.16
VCX3A-202ENST00000398729 ZDHHC4Q9NPG8 344 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 VPS45Q9NRW7 570 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 ABCC13Q9NSE7 274 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 BCCIPQ9P287 314 aaKnown RBP eCLIP14.03□□□□□ -0.16
VCX3A-202ENST00000398729 AGO1Q9UL18 857 aaKnown RBP14.03□□□□□ -0.16
VCX3A-202ENST00000398729 ZMIZ1Q9ULJ6 1067 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 STARD13Q9Y3M8 1113 aa14.03□□□□□ -0.16
VCX3A-202ENST00000398729 PCNX2A6NKB5 2137 aa14.02□□□□□ -0.16
VCX3A-202ENST00000398729 YJEFN3A6XGL0 299 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 C4orf47A7E2U8 309 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 E7ENQ6 273 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 TOP3BO95985 862 aaKnown RBP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 CYBBP04839 570 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 KRT5P13647 590 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 HNRNPLP14866 589 aaKnown RBP eCLIP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 NTSR1P30989 418 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 HARS2P49590 506 aaKnown RBP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 RGS7P49802 495 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 ZNF132P52740 706 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 DAOAP59103 153 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 COL9A2Q14055 689 aaPredicted RBP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 RNF43Q68DV7 783 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 SDE2Q6IQ49 451 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 PMF1Q6P1K2 205 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 ENOSF1Q7L5Y1 443 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 FMNL3Q8IVF7 1028 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 KDF1Q8NAX2 398 aaPredicted RBP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 IRGQQ8WZA9 623 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 HSFY1Q96LI6 401 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 FAM81BQ96LP2 452 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 KREMEN1Q96MU8 473 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 ZSWIM1Q9BR11 485 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 TMEM121BQ9BXQ6 578 aaPredicted RBP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 UBE2TQ9NPD8 197 aaPredicted RBP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 PLK2Q9NYY3 685 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 CNTN6Q9UQ52 1028 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 INVSQ9Y283 1065 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 HBS1LQ9Y450 684 aaKnown RBP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 ITPR1Q14643 2758 aa14.02□□□□□ -0.17
VCX3A-202ENST00000398729 MYO18AQ92614 2054 aaKnown RBP14.02□□□□□ -0.17
VCX3A-202ENST00000398729 ASCC3Q8N3C0 2202 aaKnown RBP14.01□□□□□ -0.17
VCX3A-202ENST00000398729 TCRBV21S2A2A0A5A6 115 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 BCLAF3A2AJT9 711 aaKnown RBP14.01□□□□□ -0.17
VCX3A-202ENST00000398729 PRRT4C9JH25 899 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 PENKP01210 267 aaPredicted RBP14.01□□□□□ -0.17
VCX3A-202ENST00000398729 CISD3P0C7P0 127 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 HOXB2P14652 356 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 TRIP4Q15650 581 aaPredicted RBP14.01□□□□□ -0.17
VCX3A-202ENST00000398729 TPD52L1Q16890 204 aaPredicted RBP14.01□□□□□ -0.17
VCX3A-202ENST00000398729 FYB2Q5VWT5 728 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 TOGARAM2Q6ZUX3 1019 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 CHPFQ8IZ52 775 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 PGBD3Q8N328 593 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 CPXM2Q8N436 756 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 HMGB4Q8WW32 186 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 EDEM1Q92611 657 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 GOLGA1Q92805 767 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 SPACA7Q96KW9 195 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 SFMBT1Q9UHJ3 866 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 FBXO10Q9UK96 956 aa14.01□□□□□ -0.17
VCX3A-202ENST00000398729 PIK3R2O00459 728 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 ZBTB24O43167 697 aaPredicted RBP14□□□□□ -0.17
VCX3A-202ENST00000398729 MED7O43513 233 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 FBXO21O94952 628 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 CAVIN2O95810 425 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 CALCAP01258 141 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 SPINK2P20155 84 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 WASP42768 502 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 MTIF2P46199 727 aaKnown RBP14□□□□□ -0.17
VCX3A-202ENST00000398729 MFAP3P55082 362 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 BYSLQ13895 437 aaKnown RBP14□□□□□ -0.17
VCX3A-202ENST00000398729 EGFLAMQ63HQ2 1017 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 PMS2CLQ68D20 193 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 TRIM65Q6PJ69 517 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 UNQ6494/PRO21346Q6UXR6 183 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 GBP6Q6ZN66 633 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 OLIG1Q8TAK6 271 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 MED15Q96RN5 788 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 CRACR2AQ9BSW2 395 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 HCN2Q9UL51 889 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 SLC27A6Q9Y2P4 619 aa14□□□□□ -0.17
VCX3A-202ENST00000398729 SMG1Q96Q15 3661 aaKnown RBP14□□□□□ -0.17
VCX3A-202ENST00000398729 CDX4O14627 284 aaPredicted RBP13.99□□□□□ -0.17
VCX3A-202ENST00000398729 GABBR2O75899 941 aa13.99□□□□□ -0.17
VCX3A-202ENST00000398729 LETM1O95202 739 aaPredicted RBP13.99□□□□□ -0.17
VCX3A-202ENST00000398729 LATS1O95835 1130 aa13.99□□□□□ -0.17
VCX3A-202ENST00000398729 LTFP02788 710 aa13.99□□□□□ -0.17
VCX3A-202ENST00000398729 BCKDHBP21953 392 aa13.99□□□□□ -0.17
VCX3A-202ENST00000398729 P2RY2P41231 377 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms