RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 FAM162AQ96A26 154 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 SNCAIPQ9Y6H5 919 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 NT5C1B-RDH14C9J2C7 533 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 DDX3XO00571 662 aaKnown RBP eCLIP11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 MAP3K13O43283 966 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 TBC1D12O60347 775 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 SERPINF2P08697 491 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 PLK1P53350 603 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 C16orf87Q6PH81 154 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 PRUNE1Q86TP1 453 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 USP6NLQ92738 828 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 CMTM5Q96DZ9 223 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 UBXN6Q9BZV1 441 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 RIC8BQ9NVN3 520 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 ACOT9Q9Y305 439 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 CFAP73A6NFT4 308 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 LRRC10BA6NIK2 292 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 ITGALP20701 1170 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 CCDC15Q0P6D6 951 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 WSCD1Q658N2 575 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 OTOAQ7RTW8 1153 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 LRRN4Q8WUT4 740 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 SEMA4DQ92854 862 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 HES6Q96HZ4 224 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 PAFAH2Q99487 392 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 ULBP1Q9BZM6 244 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 ZNF518BQ9C0D4 1074 aa11.86□□□□□ -0.51
PCDHGA8-201ENST00000398604 MAP2K7O14733 419 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 RNASEH1O60930 286 aaKnown RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 VAPBO95292 243 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 CENPAP49450 140 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 HIST2H2ACQ16777 129 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 POM121L1PQ3SYA9 428 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 HIST2H2AA3Q6FI13 130 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 LRIG3Q6UXM1 1119 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 NETO2Q8NC67 525 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 LPPQ93052 612 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 E9PBE3 544 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 KLHL41O60662 606 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 PIAS1O75925 651 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 KLHL2O95198 593 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 YWHAQP27348 245 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 HALP42357 657 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 FKBP1BP68106 108 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 HPCAP84074 193 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 BOP1Q14137 746 aaKnown RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 PLCL1Q15111 1095 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 C15orf59Q2T9L4 293 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 RETSATQ6NUM9 610 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 ASB7Q9H672 318 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 ACTR8Q9H981 624 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 VTA1Q9NP79 307 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 CYP39A1Q9NYL5 469 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 COL22A1Q8NFW1 1626 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 PKD1L3Q7Z443 1732 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 KATNA1O75449 491 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 ELK3P41970 407 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 CAMK2GQ13555 558 aaPredicted RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 EML3Q32P44 896 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 FIGNQ5HY92 759 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 LGI2Q8N0V4 545 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 EXD1Q8NHP7 514 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 PRPF18Q99633 342 aaKnown RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 TLR8Q9NR97 1041 aaKnown RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 NSMCE4AQ9NXX6 385 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 GNG14A0A1W2PPG7 69 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 CAPN15O75808 1086 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 EGFRP00533 1210 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 SKOR1P84550 965 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 MED21Q13503 144 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 AARS2Q5JTZ9 985 aaKnown RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 AGBL2Q5U5Z8 902 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 SDHAF4Q5VUM1 108 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 TRMT11Q7Z4G4 463 aaKnown RBP11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 CNDP1Q96KN2 507 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 ZNF556Q9HAH1 456 aa11.85□□□□□ -0.51
PCDHGA8-201ENST00000398604 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 CYP7B1O75881 506 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 MICAL2O94851 1124 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 RARGP13631 454 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 MIPP30301 263 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 MAGED4Q96JG8 741 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 ACOX2Q99424 681 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 IKZF4Q9H2S9 585 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 DSEQ9UL01 958 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 PHTF1Q9UMS5 762 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 NFASCO94856 1347 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 PARNO95453 639 aaKnown RBP11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 ZSCAN5DPP0CG00 497 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 ITGB5P18084 799 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 ATP13A4Q4VNC1 1196 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 KCNT2Q6UVM3 1135 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 UNC45BQ8IWX7 931 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 MTO1Q9Y2Z2 717 aaKnown RBP11.84□□□□□ -0.51
PCDHGA8-201ENST00000398604 MOXD2PA6NHM9 499 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms