RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 KIZQ2M2Z5 673 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 TIGD7Q6NT04 549 aaPredicted RBP16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 C2orf69Q8N8R5 385 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 IL31RAQ8NI17 732 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 OLA1Q9NTK5 396 aaKnown RBP16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 SEPT3Q9UH03 358 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 ZNF229Q9UJW7 825 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 R3HDM2Q9Y2K5 976 aaKnown RBP16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 HEATR9A2RTY3 570 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 C5orf60A6NFR6 353 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 KDM1AO60341 852 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 APOA1P02647 267 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 AGKQ53H12 422 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 NBPF12Q5TAG4 269 aaPredicted RBP16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 NT5DC4Q86YG4 428 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 ZFRQ96KR1 1074 aaKnown RBP16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 ASTN2O75129 1339 aaPredicted RBP16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 PTGIRP43119 386 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 SCUBE3Q8IX30 993 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 FITM2Q8N6M3 262 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 GPRC5AQ8NFJ5 357 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 OR9Q1Q8NGQ5 310 aa16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 USP13Q92995 863 aaPredicted RBP16.82■□□□□ 0.28
CTDSP2-201ENST00000398073 A0A1W2PPM1 405 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 NUP107P57740 925 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 ADCK1Q86TW2 530 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 KCNMB4Q86W47 210 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 FBXO16Q8IX29 292 aaPredicted RBP16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 ZNF384Q8TF68 577 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 RBBP8Q99708 897 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 BRD8Q9H0E9 1235 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 SLC13A4Q9UKG4 626 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 VPS9D1Q9Y2B5 631 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 TMEM191CA6NGB0 347 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 MGRN1O60291 552 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 MTA2O94776 668 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 FOXD4Q12950 439 aaPredicted RBP16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 GSTA3Q16772 222 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 SNX32Q86XE0 403 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 ECHDC2Q86YB7 292 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 OR6Y1Q8NGX8 325 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 VPS50Q96JG6 964 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 CATSPER2Q96P56 530 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 CEP41Q9BYV8 373 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 CASS4Q9NQ75 786 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 GRHL1Q9NZI5 618 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 PCDHGB4Q9UN71 923 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 ADGRA2Q96PE1 1338 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 LACTBL1A8MY62 500 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 FANCGO15287 622 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 CLASP2O75122 1294 aaKnown RBP16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 BANF1O75531 89 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 CSDE1O75534 798 aaKnown RBP16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 NPY2RP49146 381 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 SPDYAQ5MJ70 313 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 C16orf46Q6P387 395 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 FAM13CQ8NE31 585 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 PYDC1Q8WXC3 89 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 OPTNQ96CV9 577 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 RNF157Q96PX1 679 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 SIX2Q9NPC8 291 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 AFF4Q9UHB7 1163 aaKnown RBP16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 M0R3G1 203 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 SLC2A3P11169 496 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 RGS4P49798 205 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 YWHAZP63104 245 aaKnown RBP16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 ANKRD13AQ8IZ07 590 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 ACMSDQ8TDX5 336 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 PRPF18Q99633 342 aaKnown RBP16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 GPAMQ9HCL2 828 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
CTDSP2-201ENST00000398073 CYB561D2O14569 222 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 HNRNPRO43390 633 aaKnown RBP16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 RASSF9O75901 435 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 USP1O94782 785 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 PGK2P07205 417 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 MMP8P22894 467 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 PTP4A2Q12974 167 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 PLEKHA7Q6IQ23 1121 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 PIGWQ7Z7B1 504 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 OR5B17Q8NGF7 314 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 HELQQ8TDG4 1101 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 ZNF333Q96JL9 665 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 PRDM16Q9HAZ2 1276 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 NMRAL1Q9HBL8 299 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 LGALS13Q9UHV8 139 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 APPL1Q9UKG1 709 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 TRHDEQ9UKU6 1024 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 LZTS1Q9Y250 596 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 EFR3BQ9Y2G0 817 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 STXBP5LQ9Y2K9 1186 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 RPTORQ8N122 1335 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 LIN7AO14910 233 aaPredicted RBP16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 TGFB2P61812 414 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 CSHL1Q14406 222 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 ACCSLQ4AC99 568 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 TNIP2Q8NFZ5 429 aa16.8■□□□□ 0.28
CTDSP2-201ENST00000398073 RFWD2Q8NHY2 731 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms