RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 FCRL2Q96LA5 508 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ASB16Q96NS5 453 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 NCAPGQ9BPX3 1015 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SMG9Q9H0W8 520 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PRDM6Q9NQX0 595 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SMPD4Q9NXE4 827 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 COX16Q9P0S2 106 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CAPN6Q9Y6Q1 641 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ZFP37Q9Y6Q3 630 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 RNF8O76064 485 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TCF3P15923 654 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PCK1P35558 622 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SLC1A1P43005 524 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 RING1Q06587 406 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PPP2R5DQ14738 602 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SMAD2Q15796 467 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PUS10Q3MIT2 529 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 FAM78AQ5JUQ0 283 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 DAB2IPQ5VWQ8 1189 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SLFN11Q7Z7L1 901 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ARID3BQ8IVW6 561 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ADAMTS19Q8TE59 1207 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SMARCD2Q92925 531 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TRPV4Q9HBA0 871 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 GKN1Q9NS71 199 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TDP1Q9NUW8 608 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CCL26Q9Y258 94 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 USTQ9Y2C2 406 aa20.25■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PALMO75781 387 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 STC2O76061 302 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 HMBSP08397 361 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 LAMP2P13473 410 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 MIPP30301 263 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 GBP2P32456 591 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 USP4Q13107 963 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ZC3H12AQ5D1E8 599 aaKnown RBP20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CC2D1AQ6P1N0 951 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SND1Q7KZF4 910 aaKnown RBP eCLIP20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 OTOP3Q7RTS5 596 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 DAAM2Q86T65 1068 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 FAM131BQ86XD5 332 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 DDX42Q86XP3 938 aaKnown RBP eCLIP20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 C17orf53Q8N3J3 647 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 WBP2Q969T9 261 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 GOLPH3Q9H4A6 298 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 KIF9Q9HAQ2 790 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ARHGEF38Q9NXL2 777 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 EPS15L1Q9UBC2 864 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ALG6Q9Y672 507 aa20.24■□□□□ 0.83
MAP1LC3A-203ENST00000397709 KCNU1A8MYU2 1149 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 LEFTY2O00292 366 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 GREM1O60565 184 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SLC2A3P11169 496 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TCF4P15884 667 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 COMTP21964 271 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 FCARP24071 287 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CCR1P32246 355 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 KCNQ1P51787 676 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SLC25A11Q02978 314 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TFF2Q03403 129 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ZNF77Q15935 545 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 BRMS1LQ5PSV4 323 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 NUGGCQ68CJ6 796 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PTCRAQ6ISU1 281 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SH3RF2Q8TEC5 729 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PRUNE2Q8WUY3 3088 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 NTAN1Q96AB6 310 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PEBP4Q96S96 227 aa20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PHF7Q9BWX1 381 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 IRX2Q9BZI1 471 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.23■□□□□ 0.83
MAP1LC3A-203ENST00000397709 IRF1P10914 325 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TAS2R40P59535 323 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CYP4V2Q6ZWL3 525 aaPredicted RBP20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 UNC45BQ8IWX7 931 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SYCE1Q8N0S2 351 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CELF5Q8N6W0 485 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CCDC185Q8N715 623 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 RIN3Q8TB24 985 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 RNF34Q969K3 372 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 RSPRY1Q96DX4 576 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ALS2CR12Q96Q35 445 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 WDCPQ9H6R7 721 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ANLNQ9NQW6 1124 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 OBP2AQ9NY56 170 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CFAP97Q9P2B7 532 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 USP18Q9UMW8 372 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 HYOU1Q9Y4L1 999 aa20.22■□□□□ 0.83
MAP1LC3A-203ENST00000397709 C5orf42Q9H799 3197 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 I6L893 689 aaPredicted RBP20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SPOPO43791 374 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 APOEP02649 317 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 KLKB1P03952 638 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 IL1R2P27930 398 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 VIPR2P41587 438 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SCAPQ12770 1279 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 SCYL2Q6P3W7 929 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 Q6ZNB5 142 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TRIM58Q8NG06 486 aa20.21■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CD101Q93033 1021 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms