RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FAM50BQ9Y247 325 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 TLR6Q9Y2C9 796 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 ZFP37Q9Y6Q3 630 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 BUB1BO60566 1050 aaPredicted RBP24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 ENDOD1O94919 500 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 MOCS3O95396 460 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 PRAMEF12O95522 483 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 SP100P23497 879 aaPredicted RBP24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 WEE1P30291 646 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 ATXN1P54253 815 aaKnown RBP24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 ACAP1Q15027 740 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 AAK1Q2M2I8 961 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 BNIPLQ7Z465 357 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 CCAR2Q8N163 923 aaKnown RBP24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 RNF10Q8N5U6 811 aaKnown RBP24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 NIPA2Q8N8Q9 360 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 TTC16Q8NEE8 873 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 SMARCD2Q92925 531 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 RNF34Q969K3 372 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 ACSF2Q96CM8 615 aaPredicted RBP24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 ASB16Q96NS5 453 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 CCL26Q9Y258 94 aa24.56■■□□□ 1.52
TSPAN4-203ENST00000397397 TCF20Q9UGU0 1960 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-203ENST00000397397 LAMP2P13473 410 aa24.55■■□□□ 1.52
TSPAN4-203ENST00000397397 DEKP35659 375 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-203ENST00000397397 HDAC4P56524 1084 aa24.55■■□□□ 1.52
TSPAN4-203ENST00000397397 EIF4EBP2Q13542 120 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-203ENST00000397397 PLD4Q96BZ4 506 aa24.55■■□□□ 1.52
TSPAN4-203ENST00000397397 FCRL2Q96LA5 508 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-203ENST00000397397 PHF7Q9BWX1 381 aaPredicted RBP24.55■■□□□ 1.52
TSPAN4-203ENST00000397397 LEFTY2O00292 366 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 ZXDBP98169 803 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 ZC3H12AQ5D1E8 599 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 SCYL2Q6P3W7 929 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 DDX42Q86XP3 938 aaKnown RBP eCLIP24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 TDRD5Q8NAT2 981 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 ADAMTS19Q8TE59 1207 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 SH3RF2Q8TEC5 729 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 SLC39A13Q96H72 371 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 NCAPGQ9BPX3 1015 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 TMEM51Q9NW97 253 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 CFAP97Q9P2B7 532 aa24.54■■□□□ 1.52
TSPAN4-203ENST00000397397 USP27XA6NNY8 438 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 STC2O76061 302 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 IGLV3-27P01718 113 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 CCR1P32246 355 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 MAN1A1P33908 653 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 SSR1P43307 286 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 CXCR3P49682 368 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 RING1Q06587 406 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 DAB2IPQ5VWQ8 1189 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 CC2D1AQ6P1N0 951 aaPredicted RBP24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 DAAM2Q86T65 1068 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 FAM131BQ86XD5 332 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 CPNE8Q86YQ8 564 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 ARFGAP1Q8N6T3 406 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 CELF5Q8N6W0 485 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 KIAA1524Q8TCG1 905 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 WBP2Q969T9 261 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 WDCPQ9H6R7 721 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 KIF9Q9HAQ2 790 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 TRPV4Q9HBA0 871 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.53■■□□□ 1.521e-6■■■□□ 18.3
TSPAN4-203ENST00000397397 EPS15L1Q9UBC2 864 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 SH3BP1Q9Y3L3 701 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 NR2E1Q9Y466 385 aa24.53■■□□□ 1.52
TSPAN4-203ENST00000397397 GOLGA6L9A6NEM1 432 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 LRCH4O75427 683 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 APOEP02649 317 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 SLC2A3P11169 496 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 VIPR2P41587 438 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 C11orf63Q6NUN7 778 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 ST13P5Q8NFI4 369 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 NECAB3Q96P71 396 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 GOLPH3Q9H4A6 298 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 ZFP14Q9HCL3 533 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 PCSK1NQ9UHG2 260 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 ZKSCAN5Q9Y2L8 839 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 GRID2IPA4D2P6 1211 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 C2CD4DB7Z1M9 353 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 PALMO75781 387 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 IL9P15248 144 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 MIPP30301 263 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 PCK1P35558 622 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 SLC1A1P43005 524 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 HARS2P49590 506 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 USP4Q13107 963 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 PPP2R5DQ14738 602 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 BRMS1LQ5PSV4 323 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 NUGGCQ68CJ6 796 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 UNC45BQ8IWX7 931 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 RPGRIP1Q96KN7 1286 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 LSM7Q9UK45 103 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 HYOU1Q9Y4L1 999 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 ALG6Q9Y672 507 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 CAPN6Q9Y6Q1 641 aa24.52■■□□□ 1.52
TSPAN4-203ENST00000397397 MOCS2O96007 188 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 TCF3P15923 654 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 COMTP21964 271 aa24.51■■□□□ 1.51
TSPAN4-203ENST00000397397 FCARP24071 287 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms