RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 LY6KQ17RY6 165 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 HPS6Q86YV9 775 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 IQCGQ9H095 443 aaKnown RBP14.4□□□□□ -0.1
NUP98-204ENST00000397004 VPS33BQ9H267 617 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 NDE1Q9NXR1 346 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 I3L4J1 428 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 ITGB3P05106 788 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 PTPRAP18433 802 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 POLR2BP30876 1174 aaKnown RBP14.4□□□□□ -0.1
NUP98-204ENST00000397004 ICAM3P32942 547 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 GSTA3Q16772 222 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 EEPD1Q7L9B9 569 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 SAMD7Q7Z3H4 446 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 PPFIBP2Q8ND30 876 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 EBNA1BP2Q99848 306 aaKnown RBP14.4□□□□□ -0.1
NUP98-204ENST00000397004 ACSS2Q9NR19 701 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 PAK5Q9P286 719 aa14.4□□□□□ -0.1
NUP98-204ENST00000397004 PROCP04070 461 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 IDH3AP50213 366 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 WASHC5Q12768 1159 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 STX3Q13277 289 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 PMF1Q6P1K2 205 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 FRMD7Q6ZUT3 714 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 TMEM176AQ96HP8 235 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 EPAS1Q99814 870 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 SNRNP25Q9BV90 132 aaKnown RBP14.39□□□□□ -0.11
NUP98-204ENST00000397004 MAD1L1Q9Y6D9 718 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 A6NJR5 290 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 TRDMT1O14717 391 aaKnown RBP14.39□□□□□ -0.11
NUP98-204ENST00000397004 ZBTB14O43829 449 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 AP3M2P53677 418 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 HSDL1Q3SXM5 330 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 JADE1Q6IE81 842 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 ILDR2Q71H61 639 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 CRLF3Q8IUI8 442 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 APLFQ8IW19 511 aaPredicted RBP14.39□□□□□ -0.11
NUP98-204ENST00000397004 AGBL3Q8NEM8 1001 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 ARNTL2Q8WYA1 636 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 CCDC124Q96CT7 223 aaKnown RBP14.39□□□□□ -0.11
NUP98-204ENST00000397004 CDT1Q9H211 546 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 SOX13Q9UN79 622 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 BCLAF3A2AJT9 711 aaKnown RBP14.39□□□□□ -0.11
NUP98-204ENST00000397004 SPAG6O75602 509 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 GPD1P21695 349 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 ABCD1P33897 745 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 STAT5BP51692 787 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 HDAC4P56524 1084 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 TSHZ1Q6ZSZ6 1077 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 C10orf107Q8IVU9 208 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 HIPK4Q8NE63 616 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 CNPY3Q9BT09 278 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 THAP1Q9NVV9 213 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 ANGPTL2Q9UKU9 493 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 LOC285556D6RIA3 1793 aa14.39□□□□□ -0.11
NUP98-204ENST00000397004 SPDYE16A6NNV3 312 aaPredicted RBP14.38□□□□□ -0.11
NUP98-204ENST00000397004 LACTBL1A8MY62 500 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 HCRTO43612 131 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 CDK7P50613 346 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 EPHB1P54762 984 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 TCHHL1Q5QJ38 904 aaPredicted RBP14.38□□□□□ -0.11
NUP98-204ENST00000397004 N4BP2L1Q5TBK1 243 aaPredicted RBP14.38□□□□□ -0.11
NUP98-204ENST00000397004 ATG16L1Q676U5 607 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 SCYL2Q6P3W7 929 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 DHDDSQ86SQ9 333 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 EGFL6Q8IUX8 553 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 OR6Y1Q8NGX8 325 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 MAPK15Q8TD08 544 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 CLEC4CQ8WTT0 213 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 SGIP1Q9BQI5 828 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 GPAMQ9HCL2 828 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 MAN1C1Q9NR34 630 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 KCNG1Q9UIX4 513 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 WDR27A2RRH5 827 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 TPP1O14773 563 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 PGGT1BP53609 377 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 AP2B1P63010 937 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 GK3PQ14409 553 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 RBBP5Q15291 538 aaKnown RBP14.38□□□□□ -0.11
NUP98-204ENST00000397004 LIN52Q52LA3 116 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 SCUBE3Q8IX30 993 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 GSDMBQ8TAX9 411 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 PIWIL2Q8TC59 973 aaKnown RBP14.38□□□□□ -0.11
NUP98-204ENST00000397004 CDHR1Q96JP9 859 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 ACAD9Q9H845 621 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 GBA2Q9HCG7 927 aaPredicted RBP14.38□□□□□ -0.11
NUP98-204ENST00000397004 ZDHHC7Q9NXF8 308 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 LOC100653049A0A140TA62 436 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 CCNT2O60583 730 aaKnown RBP14.38□□□□□ -0.11
NUP98-204ENST00000397004 KRT34O76011 436 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 VAV1P15498 845 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 ITGAXP20702 1163 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 NIPAL4Q0D2K0 466 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 PRKG1Q13976 671 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 OLFML1Q6UWY5 402 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 NAPRTQ6XQN6 538 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 CYP4F11Q9HBI6 524 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 ASNSD1Q9NWL6 643 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 TMEM216Q9P0N5 145 aa14.38□□□□□ -0.11
NUP98-204ENST00000397004 EVPLQ92817 2033 aa14.37□□□□□ -0.11
NUP98-204ENST00000397004 SLC1A6P48664 564 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms