RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 SEC23BQ15437 767 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 PFKFB4Q16877 469 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 TUBB8Q3ZCM7 444 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 CEP78Q5JTW2 689 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 CC2D1BQ5T0F9 858 aaKnown RBP4.79□□□□□ -1.64
CMC1-202ENST00000396610 C10orf62Q5T681 223 aaPredicted RBP4.79□□□□□ -1.64
CMC1-202ENST00000396610 LIN54Q6MZP7 749 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 VSTM1Q6UX27 236 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 C16orf89Q6UX73 402 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 TTC30AQ86WT1 665 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 MYLK4Q86YV6 388 aaPredicted RBP4.79□□□□□ -1.64
CMC1-202ENST00000396610 ATG16L2Q8NAA4 619 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 SLC22A17Q8WUG5 538 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 PMM1Q92871 262 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 MCRS1Q96EZ8 462 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 HIC2Q96JB3 615 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 ADGRE3Q9BY15 652 aa4.79□□□□□ -1.64
CMC1-202ENST00000396610 GAR1Q9NY12 217 aaKnown RBP4.79□□□□□ -1.64
CMC1-202ENST00000396610 SCAF8Q9UPN6 1271 aaKnown RBP4.79□□□□□ -1.64
CMC1-202ENST00000396610 ACKR2O00590 384 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 FCHO1O14526 889 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 DNPH1O43598 174 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 RPP40O75818 363 aaKnown RBP4.78□□□□□ -1.64
CMC1-202ENST00000396610 CER1O95813 267 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 LDHAP00338 332 aaKnown RBP4.78□□□□□ -1.64
CMC1-202ENST00000396610 MATN1P21941 496 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 NDUFS1P28331 727 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 EPHB2P29323 1055 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 TRAPPC10P48553 1259 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 SRSF4Q08170 494 aaKnown RBP4.78□□□□□ -1.64
CMC1-202ENST00000396610 FOXF2Q12947 444 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 OS9Q13438 667 aaPredicted RBP4.78□□□□□ -1.64
CMC1-202ENST00000396610 GAB1Q13480 694 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 ZNF268Q14587 947 aaPredicted RBP4.78□□□□□ -1.64
CMC1-202ENST00000396610 ELF2Q15723 593 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 CCDC142Q17RM4 750 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 BTBD16Q32M84 506 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 ZACNQ401N2 412 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 C4orf46Q504U0 113 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 COLEC12Q5KU26 742 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 OR52L2PQ8NGH6 319 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 OR1N1Q8NGS0 311 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 OVCA2Q8WZ82 227 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 RMDN3Q96TC7 470 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 TP63Q9H3D4 680 aaPredicted RBP4.78□□□□□ -1.64
CMC1-202ENST00000396610 CDCP1Q9H5V8 836 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 FBXO28Q9NVF7 368 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 FLRT1Q9NZU1 646 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 LRFN1Q9P244 771 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 KLHL13Q9P2N7 655 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 COMMD10Q9Y6G5 202 aa4.78□□□□□ -1.64
CMC1-202ENST00000396610 M0QYT0 321 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 RNF8O76064 485 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
CMC1-202ENST00000396610 GYS1P13807 737 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 MMP8P22894 467 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 ARHGAP25P42331 645 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 BLMHQ13867 455 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 PTK2BQ14289 1009 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 SUPT20HL1Q3ZLR7 823 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 RINT1Q6NUQ1 792 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 RANBP10Q6VN20 620 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 SRRM1Q8IYB3 904 aaKnown RBP4.77□□□□□ -1.65
CMC1-202ENST00000396610 NPIPB3Q92617 1050 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 KATNAL1Q9BW62 490 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 RNF26Q9BY78 433 aaPredicted RBP4.77□□□□□ -1.65
CMC1-202ENST00000396610 KCNK9Q9NPC2 374 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 RXFP3Q9NSD7 469 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 SEMA5BQ9P283 1151 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 UBE2J1Q9Y385 318 aaPredicted RBP4.77□□□□□ -1.65
CMC1-202ENST00000396610 PCDHB7Q9Y5E2 793 aa4.77□□□□□ -1.65
CMC1-202ENST00000396610 C16orf96A6NNT2 1141 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 KIF28PB7ZC32 967 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 PPP6CO00743 305 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 PRYO14603 147 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 TUBB4AP04350 444 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 CELA2AP08217 269 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 CERS1P27544 350 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 THBS4P35443 961 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 CNGA3Q16281 694 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 TRIM71Q2Q1W2 868 aaKnown RBP4.76□□□□□ -1.65
CMC1-202ENST00000396610 TMEM63BQ5T3F8 832 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 ACSM6Q6P461 480 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 CCDC174Q6PII3 467 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 KYAT3Q6YP21 454 aaKnown RBP4.76□□□□□ -1.65
CMC1-202ENST00000396610 ZNF813Q6ZN06 617 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 YTHDF3Q7Z739 585 aaKnown RBP4.76□□□□□ -1.65
CMC1-202ENST00000396610 CACNA2D3Q8IZS8 1091 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 GALNT16Q8N428 558 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 ENAHQ8N8S7 591 aaPredicted RBP4.76□□□□□ -1.65
CMC1-202ENST00000396610 OSR1Q8TAX0 266 aaPredicted RBP4.76□□□□□ -1.65
CMC1-202ENST00000396610 ZNF398Q8TD17 642 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 AKAP1Q92667 903 aaKnown RBP eCLIP4.76□□□□□ -1.65
CMC1-202ENST00000396610 ARPC5LQ9BPX5 153 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 PAAF1Q9BRP4 392 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 ELOVL1Q9BW60 279 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 QTRT1Q9BXR0 403 aaKnown RBP4.76□□□□□ -1.65
CMC1-202ENST00000396610 PTPRHQ9HD43 1115 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 DACT1Q9NYF0 836 aa4.76□□□□□ -1.65
CMC1-202ENST00000396610 GRHPRQ9UBQ7 328 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms