RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 IPO4Q8TEX9 1081 aaKnown RBP16.92■□□□□ 0.3
CXCL12-206ENST00000395795 DCLK3Q9C098 648 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 SLC6A17Q9H1V8 727 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 LRRC4Q9HBW1 653 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 CNGB3Q9NQW8 809 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 TMEM74BQ9NUR3 256 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 CACNA2D2Q9NY47 1150 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 CALCOCO1Q9P1Z2 691 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 KIAA1468Q9P260 1216 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 HESX1Q9UBX0 185 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 RAD54BQ9Y620 910 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 MSI1O43347 362 aaKnown RBP16.91■□□□□ 0.3
CXCL12-206ENST00000395795 ADRB1P08588 477 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 NDUFV2P19404 249 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 HOXD9P28356 352 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-206ENST00000395795 CHKAP35790 457 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 PREPLQ4J6C6 727 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-206ENST00000395795 PPM1JQ5JR12 505 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 PEAR1Q5VY43 1037 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-206ENST00000395795 TRMT11Q7Z4G4 463 aaKnown RBP16.91■□□□□ 0.3
CXCL12-206ENST00000395795 C11orf74Q86VG3 221 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 TRIML1Q8N9V2 468 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 PLD4Q96BZ4 506 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 ERLEC1Q96DZ1 483 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 INTS2Q9H0H0 1204 aaKnown RBP16.91■□□□□ 0.3
CXCL12-206ENST00000395795 THAP10Q9P2Z0 257 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-206ENST00000395795 CYTH4Q9UIA0 394 aa16.91■□□□□ 0.3
CXCL12-206ENST00000395795 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 IGHV1OR15-9A0A0B4J2B8 117 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 PIK3R2O00459 728 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 CDX4O14627 284 aaPredicted RBP16.9■□□□□ 0.3
CXCL12-206ENST00000395795 GNA14O95837 355 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 AFPP02771 609 aaKnown RBP16.9■□□□□ 0.3
CXCL12-206ENST00000395795 LCP1P13796 627 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 GPD2P43304 727 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 SGSHP51688 502 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 SLC8A3P57103 927 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 APBA1Q02410 837 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 DPY19L2P1Q6NXN4 242 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 RSRC2Q7L4I2 434 aaKnown RBP16.9■□□□□ 0.3
CXCL12-206ENST00000395795 TMEFF1Q8IYR6 380 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 CHPFQ8IZ52 775 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 C12orf50Q8NA57 414 aaPredicted RBP16.9■□□□□ 0.3
CXCL12-206ENST00000395795 MRGPRX1Q96LB2 322 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 ACP6Q9NPH0 428 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 STRIP2Q9ULQ0 834 aa16.9■□□□□ 0.3
CXCL12-206ENST00000395795 HBS1LQ9Y450 684 aaKnown RBP16.9■□□□□ 0.3
CXCL12-206ENST00000395795 LAMA1P25391 3075 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 BECN2A8MW95 431 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 M0QYV0 167 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 C7P10643 843 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 IL12RB1P42701 662 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 UBE2HP62256 183 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 IRX4P78413 519 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 CAMK4Q16566 473 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 DENND1BQ6P3S1 775 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 GJB7Q6PEY0 223 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 KIAA0907Q7Z7F0 614 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-206ENST00000395795 IRGQQ8WZA9 623 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 MYEOVQ96EZ4 313 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 LMLNQ96KR4 655 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 HSFY1Q96LI6 401 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 IPO9Q96P70 1041 aaKnown RBP16.89■□□□□ 0.29
CXCL12-206ENST00000395795 LSM14BQ9BX40 385 aaKnown RBP16.89■□□□□ 0.29
CXCL12-206ENST00000395795 ABCC13Q9NSE7 274 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 OLA1Q9NTK5 396 aaKnown RBP16.89■□□□□ 0.29
CXCL12-206ENST00000395795 RWDD2AQ9UIY3 292 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.89■□□□□ 0.29
CXCL12-206ENST00000395795 STON1Q9Y6Q2 735 aa16.89■□□□□ 0.29
CXCL12-206ENST00000395795 MUC22E2RYF6 1773 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-206ENST00000395795 TPRP12270 2363 aaKnown RBP16.88■□□□□ 0.29
CXCL12-206ENST00000395795 HLA-FP30511 346 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 SLC6A4P31645 630 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 DHPSP49366 369 aaPredicted RBP16.88■□□□□ 0.29
CXCL12-206ENST00000395795 FAM133BQ5BKY9 247 aaKnown RBP16.88■□□□□ 0.29
CXCL12-206ENST00000395795 SPDYCQ5MJ68 293 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 NADSYN1Q6IA69 706 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 NUDT18Q6ZVK8 323 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 ARMCX6Q7L4S7 300 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 CYP2U1Q7Z449 544 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 SLC41A1Q8IVJ1 513 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 SIX6OS1Q8N1H7 587 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 WFDC5Q8TCV5 224 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 SORCS1Q8WY21 1168 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 EDEM2Q9BV94 578 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 SLC4A5Q9BY07 1137 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 MKRN2Q9H000 416 aaKnown RBP16.88■□□□□ 0.29
CXCL12-206ENST00000395795 BCCIPQ9P287 314 aaKnown RBP eCLIP16.88■□□□□ 0.29
CXCL12-206ENST00000395795 EVLQ9UI08 416 aaPredicted RBP16.88■□□□□ 0.29
CXCL12-206ENST00000395795 AJAP1Q9UKB5 411 aaPredicted RBP16.88■□□□□ 0.29
CXCL12-206ENST00000395795 PILRBQ9UKJ0 227 aa16.88■□□□□ 0.29
CXCL12-206ENST00000395795 CKAP5Q14008 2032 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 C4orf47A7E2U8 309 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 LATS1O95835 1130 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 SLC9A1P19634 815 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 ITPKAP23677 461 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 STILQ15468 1287 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 FUT11Q495W5 492 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 TRIM65Q6PJ69 517 aa16.87■□□□□ 0.29
CXCL12-206ENST00000395795 LPCAT2Q7L5N7 544 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms