RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 COG7P83436 770 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 MAP7Q14244 749 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 C6orf52Q5T4I8 152 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 ANGEL2Q5VTE6 544 aaKnown RBP14.78□□□□□ -0.04
CLIP2-203ENST00000395060 SPNS2Q8IVW8 549 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 ARHGAP18Q8N392 663 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 SLC7A3Q8WY07 619 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 OLFM3Q96PB7 478 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 COPS7BQ9H9Q2 264 aaPredicted RBP14.78□□□□□ -0.04
CLIP2-203ENST00000395060 RNF19AQ9NV58 838 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 AFG3L2Q9Y4W6 797 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 CENPFP49454 3210 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 FKBP6O75344 327 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 STBD1O95210 358 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 TRUB2O95900 331 aaKnown RBP14.78□□□□□ -0.04
CLIP2-203ENST00000395060 PHKA2P46019 1235 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 CCR10P46092 362 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 CHN2P52757 468 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 SP2Q02086 613 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 R3HDM1Q15032 1099 aaKnown RBP14.78□□□□□ -0.04
CLIP2-203ENST00000395060 CNGA3Q16281 694 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 TMCO4Q5TGY1 634 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 MYOZ2Q9NPC6 264 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 UBAP1Q9NZ09 502 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 SEPT10Q9P0V9 454 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 BTBD7Q9P203 1132 aa14.78□□□□□ -0.04
CLIP2-203ENST00000395060 STX16-NPEPL1H3BU86 382 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 CLPTM1O96005 669 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 POLR2BP30876 1174 aaKnown RBP14.77□□□□□ -0.04
CLIP2-203ENST00000395060 NUDT2P50583 147 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 GALK1P51570 392 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 POTEAQ6S8J7 498 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 XYLT1Q86Y38 959 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 TMEM174Q8WUU8 243 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 TFB1MQ8WVM0 346 aaKnown RBP14.77□□□□□ -0.04
CLIP2-203ENST00000395060 RXFP2Q8WXD0 754 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 HEXIM2Q96MH2 286 aaKnown RBP14.77□□□□□ -0.04
CLIP2-203ENST00000395060 WDR55Q9H6Y2 383 aaPredicted RBP14.77□□□□□ -0.04
CLIP2-203ENST00000395060 THAP1Q9NVV9 213 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 MFHAS1Q9Y4C4 1052 aa14.77□□□□□ -0.04
CLIP2-203ENST00000395060 NOP56O00567 594 aaKnown RBP14.77□□□□□ -0.05
CLIP2-203ENST00000395060 PRPSAP2O60256 369 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 ITGAXP20702 1163 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 ZNF132P52740 706 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 MAP3K10Q02779 954 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 NADK2Q4G0N4 442 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 TEDDM1Q5T9Z0 273 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 TMC7Q7Z402 723 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 ZSCAN18Q8TBC5 510 aaPredicted RBP14.77□□□□□ -0.05
CLIP2-203ENST00000395060 MIS12Q9H081 205 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 ATXN10Q9UBB4 475 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 LZTS1Q9Y250 596 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 COMMD3-BMI1R4GMX3 469 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 SYNJ2BP-COX16A0A087WUM0 186 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 ALDH1A3P47895 512 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 IDH3AP50213 366 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 SNRNP48Q6IEG0 339 aaKnown RBP14.77□□□□□ -0.05
CLIP2-203ENST00000395060 TRNP1Q6NT89 227 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 TRIM42Q8IWZ5 723 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 C12orf29Q8N999 325 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 KLC2Q9H0B6 622 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 RPAP3Q9H6T3 665 aaPredicted RBP14.77□□□□□ -0.05
CLIP2-203ENST00000395060 USP29Q9HBJ7 922 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 TMEM165Q9HC07 324 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 COX16Q9P0S2 106 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 FETUBQ9UGM5 382 aa14.77□□□□□ -0.05
CLIP2-203ENST00000395060 COL4A5P29400 1685 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 C1QAP02745 245 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 FGFR3P22607 806 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 GBE1Q04446 702 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 NOMO1Q15155 1222 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 NRF1Q16656 503 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 METTL25Q8N6Q8 603 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 PLD5Q8N7P1 536 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 PPP4R1Q8TF05 950 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 ZBTB14O43829 449 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 ITGA2BP08514 1039 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 ENO3P13929 434 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-203ENST00000395060 KCNA2P16389 499 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 TFE3P19532 575 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-203ENST00000395060 PCSK6P29122 969 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 CCND2P30279 289 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 TCF7P36402 384 aaPredicted RBP14.76□□□□□ -0.05
CLIP2-203ENST00000395060 CLDN10P78369 228 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 DUOXA2Q1HG44 320 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 NXNQ6DKJ4 435 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 ZBTB46Q86UZ6 589 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 TRIM50Q86XT4 487 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 DCUN1D1Q96GG9 259 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 NLRP4Q96MN2 994 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 SEMA6AQ9H2E6 1030 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 FAM49BQ9NUQ9 324 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 TMEM216Q9P0N5 145 aa14.76□□□□□ -0.05
CLIP2-203ENST00000395060 GOLGA8TH3BQL2 631 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 XPO1O14980 1071 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 B4GALT5O43286 388 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 TBC1D12O60347 775 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 ERVK-10P10266 1014 aa14.75□□□□□ -0.05
CLIP2-203ENST00000395060 YWHAEP62258 255 aaKnown RBP14.75□□□□□ -0.05
CLIP2-203ENST00000395060 CAPSQ13938 189 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms