RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 COG7P83436 770 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 EFEMP1Q12805 493 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 CCNI2Q6ZMN8 369 aaPredicted RBP22.18■■□□□ 1.14
TRAF4-203ENST00000394925 SLCO6A1Q86UG4 719 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 CACUL1Q86Y37 369 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 PRCCQ92733 491 aaPredicted RBP22.18■■□□□ 1.14
TRAF4-203ENST00000394925 DUSP16Q9BY84 665 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 IMPG2Q9BZV3 1241 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 CYP3A43Q9HB55 503 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 APOBEC3GQ9HC16 384 aaKnown RBP22.18■■□□□ 1.14
TRAF4-203ENST00000394925 PCOLCE2Q9UKZ9 415 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 FRMD4BQ9Y2L6 1034 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 NFE2L3Q9Y4A8 694 aa22.18■■□□□ 1.14
TRAF4-203ENST00000394925 CBFA2T3O75081 653 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 SLFN14P0C7P3 912 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 OXTRP30559 389 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 VAMP7P51809 220 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 ENPP2Q13822 863 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 ZNF234Q14588 700 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 PPP1R26Q5T8A7 1209 aaPredicted RBP22.17■■□□□ 1.14
TRAF4-203ENST00000394925 ZNF276Q8N554 614 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 PIWIL1Q96J94 861 aaKnown RBP22.17■■□□□ 1.14
TRAF4-203ENST00000394925 CDK5RAP1Q96SZ6 601 aaKnown RBP22.17■■□□□ 1.14
TRAF4-203ENST00000394925 DCLK3Q9C098 648 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 CCDC86Q9H6F5 360 aaKnown RBP22.17■■□□□ 1.14
TRAF4-203ENST00000394925 GAREM1Q9H706 876 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 ELOVL2Q9NXB9 296 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 CLIC5Q9NZA1 410 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 GPSM3Q9Y4H4 160 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 USP3Q9Y6I4 520 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 APC2O95996 2303 aa22.17■■□□□ 1.14
TRAF4-203ENST00000394925 CKAP5Q14008 2032 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 PTPRBP23467 1997 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 METTL12A8MUP2 240 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 BCAT2O15382 392 aaPredicted RBP22.16■■□□□ 1.14
TRAF4-203ENST00000394925 CILPO75339 1184 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 ACADMP11310 421 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 PDIA4P13667 645 aaKnown RBP22.16■■□□□ 1.14
TRAF4-203ENST00000394925 GCLMP48507 274 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 ANKS1BQ7Z6G8 1248 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 GLRX5Q86SX6 157 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 DENND1CQ8IV53 801 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 SORCS1Q8WY21 1168 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 PAGE5Q96GU1 130 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 NUP58Q9BVL2 599 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 CIPCQ9C0C6 399 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 EIF2B4Q9UI10 523 aaKnown RBP22.16■■□□□ 1.14
TRAF4-203ENST00000394925 AGO1Q9UL18 857 aaKnown RBP22.16■■□□□ 1.14
TRAF4-203ENST00000394925 CLEC4EQ9ULY5 219 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 CABIN1Q9Y6J0 2220 aa22.16■■□□□ 1.14
TRAF4-203ENST00000394925 NUMA1Q14980 2115 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 ACTN4O43707 911 aaKnown RBP22.15■■□□□ 1.14
TRAF4-203ENST00000394925 CER1O95813 267 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 CYBBP04839 570 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 TRIM49P0CI25 452 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 TRIM49CP0CI26 452 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 PRKCHP24723 683 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 MATKP42679 507 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 COPAP53621 1224 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 BNC1Q01954 994 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 ZNF394Q53GI3 561 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 FAM124AQ86V42 546 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 TAS1R2Q8TE23 839 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 NIF3L1Q9GZT8 377 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 MMRN2Q9H8L6 949 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 TM7SF3Q9NS93 570 aa22.15■■□□□ 1.14
TRAF4-203ENST00000394925 FNDC3AQ9Y2H6 1198 aaKnown RBP22.15■■□□□ 1.14
TRAF4-203ENST00000394925 IGSF10Q6WRI0 2623 aa22.14■■□□□ 1.14
TRAF4-203ENST00000394925 CALUO43852 315 aaPredicted RBP22.14■■□□□ 1.13
TRAF4-203ENST00000394925 EPHX1P07099 455 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 PPP3CAQ08209 521 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 HLA-BQ31612 363 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 IL27RAQ6UWB1 636 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 RSRC2Q7L4I2 434 aaKnown RBP22.14■■□□□ 1.13
TRAF4-203ENST00000394925 MDM1Q8TC05 714 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 DDI1Q8WTU0 396 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 HEXIM2Q96MH2 286 aaKnown RBP22.14■■□□□ 1.13
TRAF4-203ENST00000394925 DNAI2Q9GZS0 605 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 MARCH2Q9P0N8 246 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 CELSR3Q9NYQ7 3312 aa22.14■■□□□ 1.13
TRAF4-203ENST00000394925 GOLGA4Q13439 2230 aaKnown RBP22.14■■□□□ 1.13
TRAF4-203ENST00000394925 SLC12A8A0AV02 714 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 IGLV3-19P01714 112 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 ZNF883P0CG24 379 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 EIF4HQ15056 248 aaKnown RBP22.13■■□□□ 1.13
TRAF4-203ENST00000394925 E2F5Q15329 346 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 COL28A1Q2UY09 1125 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 TMEM215Q68D42 235 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 SERPINA13PQ6UXR4 307 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 SNX19Q92543 992 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 STRIP2Q9ULQ0 834 aa22.13■■□□□ 1.13
TRAF4-203ENST00000394925 LOC400499M0QZD8 3231 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 A0A1B0GVT2 93 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 MAPK13O15264 365 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 F13A1P00488 732 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 ZSCAN22P10073 491 aaPredicted RBP22.12■■□□□ 1.13
TRAF4-203ENST00000394925 ARID5AQ03989 594 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 PDZD3Q86UT5 571 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 CPXM2Q8N436 756 aa22.12■■□□□ 1.13
TRAF4-203ENST00000394925 RBBP8NLQ8NC74 664 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms