RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 BCAR1P56945 870 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 CYLC2Q14093 348 aaPredicted RBP16.89■□□□□ 0.29
PHTF1-205ENST00000393357 ANKDD1AQ495B1 522 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 ANKRD23Q86SG2 305 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 PCDH20Q8N6Y1 951 aaKnown RBP16.89■□□□□ 0.29
PHTF1-205ENST00000393357 EME1Q96AY2 570 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 PLEKHG4BQ96PX9 1271 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 BTBD7Q9P203 1132 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 PDGFRBP09619 1106 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 IDH3AP50213 366 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 ATXN1P54253 815 aaKnown RBP16.88■□□□□ 0.29
PHTF1-205ENST00000393357 SLC18A2Q05940 514 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 ENOSF1Q7L5Y1 443 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 ZNF781Q8N8C0 355 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 GMCL1P1Q8NEA9 526 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 OR52B2Q96RD2 323 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 ADPGKQ9BRR6 497 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 C20orf96Q9NUD7 363 aaPredicted RBP16.88■□□□□ 0.29
PHTF1-205ENST00000393357 HMGXB4Q9UGU5 601 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 EXTL3O43909 919 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 EDN1P05305 212 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 RGS2P41220 211 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 THOP1P52888 689 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 PRKCEQ02156 737 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 MAVSQ7Z434 540 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 CCDC60Q8IWA6 550 aaPredicted RBP16.88■□□□□ 0.29
PHTF1-205ENST00000393357 NUF2Q9BZD4 464 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 THAP1Q9NVV9 213 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 TMEM216Q9P0N5 145 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 TMCO1Q9UM00 188 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 SSX2IPQ9Y2D8 614 aa16.88■□□□□ 0.29
PHTF1-205ENST00000393357 DNAJA2O60884 412 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 METTL18O95568 372 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 GJB1P08034 283 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 SMIM18P0DKX4 95 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 SLC5A2P31639 672 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 TCF7P36402 384 aaPredicted RBP16.87■□□□□ 0.29
PHTF1-205ENST00000393357 NAA20P61599 178 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 NCAPG2Q86XI2 1143 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 DCLK2Q8N568 766 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 RIN3Q8TB24 985 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 SGF29Q96ES7 293 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 FAM210AQ96ND0 272 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 APOL2Q9BQE5 337 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
PHTF1-205ENST00000393357 HES2Q9Y543 173 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 M0QYV0 167 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 PTPN1P18031 435 aaKnown RBP16.87■□□□□ 0.29
PHTF1-205ENST00000393357 CROCCQ5TZA2 2017 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 KRT80Q6KB66 452 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 HHIPL2Q6UWX4 724 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 ZNF677Q86XU0 584 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 PQLC1Q8N2U9 271 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 MAPK15Q8TD08 544 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 WRNIP1Q96S55 665 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 PEBP4Q96S96 227 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 DHRS4Q9BTZ2 278 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 TRPV6Q9H1D0 765 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 ARHGAP26Q9UNA1 814 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 ATAD5Q96QE3 1844 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 PDGFRAP16234 1089 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 MYBPC1Q00872 1141 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 ATP1A4Q13733 1029 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 BAATQ14032 418 aaPredicted RBP16.87■□□□□ 0.29
PHTF1-205ENST00000393357 SH2D4BQ5SQS7 431 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 TRIM42Q8IWZ5 723 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 PCDHAC1Q9H158 963 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 COG4Q9H9E3 785 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 CYP26B1Q9NR63 512 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 DDX56Q9NY93 547 aaKnown RBP16.87■□□□□ 0.29
PHTF1-205ENST00000393357 MFHAS1Q9Y4C4 1052 aa16.87■□□□□ 0.29
PHTF1-205ENST00000393357 HMX2A2RU54 273 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 APOEP02649 317 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 KRT7P08729 469 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 COX4I1P13073 169 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 AVPR1AP37288 418 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 ENTPD1P49961 510 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 ZNF699Q32M78 642 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 TEX44Q53QW1 395 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 TEDDM1Q5T9Z0 273 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 SLC9A4Q6AI14 798 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 KLHL35Q6PF15 583 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 BBS12Q6ZW61 710 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 SYTL5Q8TDW5 730 aaPredicted RBP16.86■□□□□ 0.29
PHTF1-205ENST00000393357 RCN3Q96D15 328 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 PRICKLE1Q96MT3 831 aaPredicted RBP16.86■□□□□ 0.29
PHTF1-205ENST00000393357 C7orf26Q96N11 449 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 PKP2Q99959 881 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 TRMUO75648 421 aaKnown RBP16.86■□□□□ 0.29
PHTF1-205ENST00000393357 ERBB2P04626 1255 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 CHRNGP07510 517 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 CA9Q16790 459 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 FBXW8Q8N3Y1 598 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 WNK4Q96J92 1243 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 NPAS2Q99743 824 aa16.86■□□□□ 0.29
PHTF1-205ENST00000393357 CDCA7Q9BWT1 371 aaPredicted RBP16.86■□□□□ 0.29
PHTF1-205ENST00000393357 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms