RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NDST1P52848 882 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 PRKAA2P54646 552 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 LAMTOR4Q0VGL1 99 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
LCA5-202ENST00000392959 TP53BP2Q13625 1128 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 NR6A1Q15406 480 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 RIPOR1Q6ZS17 1223 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 PTAR1Q7Z6K3 402 aaPredicted RBP13.46□□□□□ -0.25
LCA5-202ENST00000392959 RAET1EQ8TD07 263 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 EPS8L1Q8TE68 723 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 MTERF3Q96E29 417 aa13.46□□□□□ -0.25
LCA5-202ENST00000392959 ZNF184Q99676 751 aaPredicted RBP13.46□□□□□ -0.25
LCA5-202ENST00000392959 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
LCA5-202ENST00000392959 MEI4A8MW99 385 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 EML1O00423 815 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 ASS1P00966 412 aaKnown RBP13.46□□□□□ -0.26
LCA5-202ENST00000392959 RAG1P15918 1043 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 MAP3K7CLP57077 242 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 AUHQ13825 339 aaKnown RBP13.46□□□□□ -0.26
LCA5-202ENST00000392959 CNGA2Q16280 664 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 ZFP1Q6P2D0 407 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 METTL7BQ6UX53 244 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 KATNAL2Q8IYT4 538 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 BHMTQ93088 406 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 FBXO32Q969P5 355 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 FAM120BQ96EK7 910 aaKnown RBP13.46□□□□□ -0.26
LCA5-202ENST00000392959 UNKQ9C0B0 810 aaKnown RBP13.46□□□□□ -0.26
LCA5-202ENST00000392959 NT5MQ9NPB1 228 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 POLG2Q9UHN1 485 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 TMCC3Q9ULS5 477 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 MROH7Q68CQ1 1323 aa13.46□□□□□ -0.26
LCA5-202ENST00000392959 WDR27A2RRH5 827 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 CLOCKO15516 846 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 CSDE1O75534 798 aaKnown RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 ZNF682O95780 498 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 MGAT1P26572 445 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 ZCCHC23Q6ZST2 131 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 MIER2Q8N344 545 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 ATG16L2Q8NAA4 619 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 MTMR9Q96QG7 549 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 SEPHS2Q99611 448 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 ADAMTS13Q76LX8 1427 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 MYBL2P10244 700 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 MLNP12872 115 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 TPH1P17752 444 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 PGAM1P18669 254 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 ITGALP20701 1170 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 MIPP30301 263 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 SOX6P35712 828 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 CDK7P50613 346 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 SLC12A3P55017 1021 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 PPIDQ08752 370 aaKnown RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 POLD3Q15054 466 aaPredicted RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 SNX32Q86XE0 403 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 DHFR2Q86XF0 187 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 OR6Y1Q8NGX8 325 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 CPB2Q96IY4 423 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 CDRT15Q96T59 188 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 PDGFCQ9NRA1 345 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 C17orf102A2RUQ5 167 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 KCNK1O00180 336 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 INPP4BO15327 924 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 PROCP04070 461 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 EIF4BP23588 611 aaKnown RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 OXCT1P55809 520 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 OTUD3Q5T2D3 398 aaPredicted RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 ZPBP2Q6X784 338 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 LRRC55Q6ZSA7 311 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 SLC44A2Q8IWA5 706 aaPredicted RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 YAF2Q8IY57 180 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 LRRC39Q96DD0 335 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 SH3GL2Q99962 352 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 KCTD14Q9BQ13 255 aaPredicted RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 BDH2Q9BUT1 245 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 TBC1D13Q9NVG8 400 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 KCNK4Q9NYG8 393 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 ITGA11Q9UKX5 1188 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 LINC00854A0A1B0GVQ3 168 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 TRDMT1O14717 391 aaKnown RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 MRASO14807 208 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 CNOT3O75175 753 aaKnown RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 AMPD1P23109 780 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 POU1F1P28069 291 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 SKIV2L2P42285 1042 aaKnown RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 LHX1P48742 406 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 VAC14Q08AM6 782 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 PGM5Q15124 567 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 KYAT3Q6YP21 454 aaKnown RBP13.45□□□□□ -0.26
LCA5-202ENST00000392959 ERO1BQ86YB8 467 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 OSCP1Q8WVF1 389 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 PRDM4Q9UKN5 801 aa13.45□□□□□ -0.26
LCA5-202ENST00000392959 RCCD1A6NED2 376 aa13.44□□□□□ -0.26
LCA5-202ENST00000392959 SNTNA6NMZ2 147 aa13.44□□□□□ -0.26
LCA5-202ENST00000392959 F8VP50 259 aa13.44□□□□□ -0.26
LCA5-202ENST00000392959 EPHB6O15197 1021 aa13.44□□□□□ -0.26
LCA5-202ENST00000392959 GUCA1CO95843 209 aa13.44□□□□□ -0.26
LCA5-202ENST00000392959 VIL1P09327 827 aaKnown RBP13.44□□□□□ -0.26
LCA5-202ENST00000392959 CETPP11597 493 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms