RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 DSG3P32926 999 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 ZNF829Q3KNS6 432 aaPredicted RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 PRAMEF18Q5VWM3 479 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 KRT39Q6A163 491 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 CPXCR1Q8N123 301 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 PIWIL2Q8TC59 973 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 C11orf70Q9BRQ4 267 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 TMEM206Q9H813 350 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 COPS7BQ9H9Q2 264 aaPredicted RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 MRPL47Q9HD33 250 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 MKS1Q9NXB0 559 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 STK39Q9UEW8 545 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 DNAJC16Q9Y2G8 782 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 IVNS1ABPQ9Y6Y0 642 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 KBTBD13C9JR72 458 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 TLR3O15455 904 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 FOXD2O60548 495 aaPredicted RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 ZMPSTE24O75844 475 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 H6PDO95479 791 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 C1QAP02745 245 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 THOC7Q6I9Y2 204 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 FASTKD5Q7L8L6 764 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 ARCQ7LC44 396 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 OTOP1Q7RTM1 612 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 NANOGNBQ7Z5D8 188 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 CENPSQ8N2Z9 138 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 TAS1R2Q8TE23 839 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 NLRP7Q8WX94 980 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 PLEKHA8Q96JA3 519 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 KCND2Q9NZV8 630 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 ARHGAP26Q9UNA1 814 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 FZD1Q9UP38 647 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 TSC22D4Q9Y3Q8 395 aa15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 GPC6Q9Y625 555 aaPredicted RBP15.12■□□□□ 0.01
VPS9D1-201ENST00000389386 IGLV3-22A0A075B6J6 115 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 GOLGA8IPA6NC78 632 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 GOLGA8JA6NMD2 632 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 FZD9O00144 591 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 KRT37O76014 449 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 FOSP01100 380 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 NFKBIAP25963 317 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 NDST2P52849 883 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 MCCD1P59942 119 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 MRPS22P82650 360 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 CLPPQ16740 277 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 PLEKHA7Q6IQ23 1121 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 ZFP1Q6P2D0 407 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 MAVSQ7Z434 540 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 KBTBD7Q8WVZ9 684 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 CASP10Q92851 521 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 TCHPQ9BT92 498 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 IFT122Q9HBG6 1241 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 TRPC7Q9HCX4 862 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 TRPV5Q9NQA5 729 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 WRAP73Q9P2S5 460 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 K7EPI3 171 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 LSM1O15116 133 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 LYPLA1O75608 230 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 OXSR1O95747 527 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 ARP10275 920 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 HMOX2P30519 316 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 PTPN7P35236 360 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 IDH3AP50213 366 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 YWHAGP61981 247 aaKnown RBP eCLIP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 DCAF6Q58WW2 860 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 SAPCD2Q86UD0 394 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 GPR180Q86V85 440 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 PPM1NQ8N819 430 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 DDHD1Q8NEL9 900 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 CCDC127Q96BQ5 260 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 ACCSQ96QU6 501 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 PKP2Q99959 881 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 SH2D3AQ9BRG2 576 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 ZNF341Q9BYN7 854 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 VPS45Q9NRW7 570 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 SAE1Q9UBE0 346 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 EBF1Q9UH73 591 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 CROTQ9UKG9 612 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 PACSIN3Q9UKS6 424 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 CDH7Q9ULB5 785 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 TEX264Q9Y6I9 313 aa15.11■□□□□ 0.01
VPS9D1-201ENST00000389386 CCDC162PA2VCL2 907 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 H3BNH8 94 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 SPTLC1O15269 473 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 TXNL4AP83876 142 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 TFDP3Q5H9I0 405 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 TEDDM1Q5T9Z0 273 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 NANOGP8Q6NSW7 305 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 RSPH3Q86UC2 560 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 PHTF2Q8N3S3 785 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 SGF29Q96ES7 293 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 SENP7Q9BQF6 1050 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 EPS15L1Q9UBC2 864 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 BAIAP3O94812 1187 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 ZBTB11O95625 1053 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 COX4I1P13073 169 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 CAP2P40123 477 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 CDKN2BP42772 138 aa15.1■□□□□ 0.01
VPS9D1-201ENST00000389386 C21orf59P57076 290 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms