RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 FAM205CA6NFA0 338 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 GH2P01242 217 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 CHRM3P20309 590 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 TGFBR2P37173 567 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 MZT2AQ6P582 158 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 USP49Q70CQ1 688 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 CHMP1BQ7LBR1 199 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 NUDT5Q9UKK9 219 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 PNPLA7Q6ZV29 1317 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 DCXO43602 365 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 FOLH1Q04609 750 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 CDC73Q6P1J9 531 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 CYP2R1Q6VVX0 501 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 EHD4Q9H223 541 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 ASAP1Q9ULH1 1129 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 RPL10AP62906 217 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 ABATP80404 500 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 H7C1W4 665 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 DLG4P78352 724 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 SLC15A2Q16348 729 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 GJB7Q6PEY0 223 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 NSUN6Q8TEA1 469 aaKnown RBP12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 LRRC40Q9H9A6 602 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 GSTK1Q9Y2Q3 226 aa12.74□□□□□ -0.37
SRGAP3-202ENST00000383836 ICE1Q9Y2F5 2266 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 OPLAHO14841 1288 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 BBOX1O75936 387 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ASNSP08243 561 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 TSPAN19P0C672 248 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ZFP69Q49AA0 526 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 TAF8Q7Z7C8 310 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ELMOD1Q8N336 334 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 CKAP2Q8WWK9 683 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 PROX1Q92786 737 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 EPB41L1Q9H4G0 881 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 STARP49675 285 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 KCTD17Q8N5Z5 321 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 FAM120BQ96EK7 910 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 RIBC2Q9H4K1 309 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 CYP4F12Q9HCS2 524 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 KLHL1Q9NR64 748 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 FAM49BQ9NUQ9 324 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 CARD8Q9Y2G2 431 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 AP5Z1O43299 807 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ADSSP30520 456 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 GTF2H1P32780 548 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 PDK2Q15119 407 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 N4BP2L1Q5TBK1 243 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 THOC7Q6I9Y2 204 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 AAR2Q9Y312 384 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ENTPD5O75356 428 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ACLYP53396 1101 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 RBP5P82980 135 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 TMEM132DQ14C87 1099 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ADHFE1Q8IWW8 467 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 LRRC17Q8N6Y2 441 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 NUDT12Q9BQG2 462 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 JPH1Q9HDC5 661 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 PCDHA10Q9Y5I2 948 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ZSCAN5CA6NGD5 496 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 VAV1P15498 845 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 RPL21P46778 160 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 SRP54P61011 504 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 C2CD6Q53TS8 623 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 SNRNP48Q6IEG0 339 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 SKA1Q96BD8 255 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 OTUD5Q96G74 571 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ORAI2Q96SN7 254 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 GZMAP12544 262 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 SLC26A3P40879 764 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 BOLA3Q53S33 107 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ZRANB3Q5FWF4 1079 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 MRNIPQ6NTE8 343 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 TSEN2Q8NCE0 465 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 KBTBD8Q8NFY9 601 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ITFG1Q8TB96 612 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 HDAC7Q8WUI4 952 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 PCDH9Q9HC56 1237 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 MAPRE3Q9UPY8 281 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 PCDHGA3Q9Y5H0 932 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 DCAF6Q58WW2 860 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ISLR2Q6UXK2 745 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 ZNF398Q8TD17 642 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 SRPK1Q96SB4 655 aaKnown RBP12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
SRGAP3-202ENST00000383836 IL18RAPO95256 599 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 FRG1Q14331 258 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 PRELID1Q9Y255 219 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 ANKRD6Q9Y2G4 727 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 CCDC162PA2VCL2 907 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 CCNG1P51959 295 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 RAB25P57735 213 aa12.72□□□□□ -0.37
SRGAP3-202ENST00000383836 RASSF6Q6ZTQ3 369 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms