RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CPXM2Q8N436 756 aa27.66■■■□□ 2.02
NPHP3-202ENST00000383282 PLD4Q96BZ4 506 aa27.66■■■□□ 2.02
NPHP3-202ENST00000383282 LRRC4Q9HBW1 653 aa27.66■■■□□ 2.02
NPHP3-202ENST00000383282 FSCN3Q9NQT6 498 aa27.66■■■□□ 2.02
NPHP3-202ENST00000383282 THAP10Q9P2Z0 257 aaPredicted RBP27.66■■■□□ 2.02
NPHP3-202ENST00000383282 UPK3BL1B0FP48 263 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 UPK3BL2E5RIL1 263 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 XPO1O14980 1071 aaKnown RBP27.65■■■□□ 2.02
NPHP3-202ENST00000383282 SYNCRIPO60506 623 aaKnown RBP27.65■■■□□ 2.02
NPHP3-202ENST00000383282 GNSP15586 552 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 PRCPP42785 496 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 FKBP3Q00688 224 aaKnown RBP27.65■■■□□ 2.02
NPHP3-202ENST00000383282 CUL2Q13617 745 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 GEN1Q17RS7 908 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 CBWD6Q4V339 395 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 SGO2Q562F6 1265 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 CBWD3Q5JTY5 395 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 CBWD5Q5RIA9 395 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 ZNF658Q5TYW1 1059 aaPredicted RBP27.65■■■□□ 2.02
NPHP3-202ENST00000383282 METTL3Q86U44 580 aaKnown RBP27.65■■■□□ 2.02
NPHP3-202ENST00000383282 DDI1Q8WTU0 396 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 ZNF419Q96HQ0 510 aaPredicted RBP27.65■■■□□ 2.02
NPHP3-202ENST00000383282 GSDMAQ96QA5 445 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 ULBP1Q9BZM6 244 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 TSPAN16Q9UKR8 245 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 COQ4Q9Y3A0 265 aa27.65■■■□□ 2.02
NPHP3-202ENST00000383282 GOLGA6L4A6NEF3 574 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 ARHGAP33O14559 1287 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 CD6P30203 668 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 BST2Q10589 180 aaKnown RBP27.64■■■□□ 2.02
NPHP3-202ENST00000383282 SEMA3BQ13214 749 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 EIF4HQ15056 248 aaKnown RBP27.64■■■□□ 2.02
NPHP3-202ENST00000383282 FUT11Q495W5 492 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 COBLL1Q53SF7 1204 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 WDR45BQ5MNZ6 344 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 PM20D1Q6GTS8 502 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 MINDY1Q8N5J2 469 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 P2RY11Q96G91 374 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 IPO9Q96P70 1041 aaKnown RBP27.64■■■□□ 2.02
NPHP3-202ENST00000383282 SLC2A11Q9BYW1 496 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 ADAM33Q9BZ11 813 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 PRDM16Q9HAZ2 1276 aa27.64■■■□□ 2.02
NPHP3-202ENST00000383282 CD19P15391 556 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 SPINK2P20155 84 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 IL12RB1P42701 662 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 HARS2P49590 506 aaKnown RBP27.63■■■□□ 2.01
NPHP3-202ENST00000383282 ARID5AQ03989 594 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 PDE4CQ08493 712 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 RNF139Q8WU17 664 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 GTPBP4Q9BZE4 634 aaKnown RBP27.63■■■□□ 2.01
NPHP3-202ENST00000383282 CIPCQ9C0C6 399 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 CD93Q9NPY3 652 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 WASF3Q9UPY6 502 aa27.63■■■□□ 2.01
NPHP3-202ENST00000383282 ASCC3Q8N3C0 2202 aaKnown RBP27.62■■■□□ 2.01
NPHP3-202ENST00000383282 C1QTNF9BB2RNN3 333 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 SMC2O95347 1197 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 C1QTNF9P0C862 333 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 RDXP35241 583 aaKnown RBP27.62■■■□□ 2.01
NPHP3-202ENST00000383282 ENPP2Q13822 863 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 PLEKHG6Q3KR16 790 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 PIP4P1Q86T03 277 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 PIWIL1Q96J94 861 aaKnown RBP27.62■■■□□ 2.01
NPHP3-202ENST00000383282 SCNM1Q9BWG6 230 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 ELOVL2Q9NXB9 296 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 USP36Q9P275 1121 aaKnown RBP27.62■■■□□ 2.01
NPHP3-202ENST00000383282 ARMCX3Q9UH62 379 aaPredicted RBP27.62■■■□□ 2.01
NPHP3-202ENST00000383282 PI4KAP42356 2102 aa27.62■■■□□ 2.01
NPHP3-202ENST00000383282 MEI4A8MW99 385 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 TULP2O00295 520 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 VDRP11473 427 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 TBXAS1P24557 533 aaPredicted RBP27.61■■■□□ 2.01
NPHP3-202ENST00000383282 ZNF445P59923 1031 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 LRRC63Q05C16 580 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 ZNF234Q14588 700 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 TRIP4Q15650 581 aaPredicted RBP27.61■■■□□ 2.01
NPHP3-202ENST00000383282 MPPE1Q53F39 396 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 FMNL3Q8IVF7 1028 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 FAM217AQ8IXS0 508 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 FMR1NBQ8N0W7 255 aaPredicted RBP27.61■■■□□ 2.01
NPHP3-202ENST00000383282 SIX6OS1Q8N1H7 587 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 PRCCQ92733 491 aaPredicted RBP27.61■■■□□ 2.01
NPHP3-202ENST00000383282 SIPA1Q96FS4 1042 aa27.61■■■□□ 2.01
NPHP3-202ENST00000383282 MKRN2Q9H000 416 aaKnown RBP27.61■■■□□ 2.01
NPHP3-202ENST00000383282 WSB2Q9NYS7 404 aaPredicted RBP27.61■■■□□ 2.01
NPHP3-202ENST00000383282 HBS1LQ9Y450 684 aaKnown RBP27.61■■■□□ 2.01
NPHP3-202ENST00000383282 TIMM44O43615 452 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 ACADMP11310 421 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 SIM1P81133 766 aaPredicted RBP27.6■■■□□ 2.01
NPHP3-202ENST00000383282 ADIGQ0VDE8 80 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 HNRNPDQ14103 355 aaKnown RBP27.6■■■□□ 2.01
NPHP3-202ENST00000383282 ANKRD40Q6AI12 368 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 TMPRSS6Q8IU80 811 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 ZC3H3Q8IXZ2 948 aaKnown RBP27.6■■■□□ 2.01
NPHP3-202ENST00000383282 SMARCE1Q969G3 411 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 TOE1Q96GM8 510 aaKnown RBP27.6■■■□□ 2.01
NPHP3-202ENST00000383282 ITM2CQ9NQX7 267 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 HOOK1Q9UJC3 728 aaKnown RBP27.6■■■□□ 2.01
NPHP3-202ENST00000383282 KIAA1257Q9ULG3 409 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 USP24Q9UPU5 2620 aa27.6■■■□□ 2.01
NPHP3-202ENST00000383282 TOP3BO95985 862 aaKnown RBP27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms