RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 ZNF180Q9UJW8 692 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 UBQLN1Q9UMX0 589 aaKnown RBP20.73■□□□□ 0.91
EBF1-202ENST00000380654 C15orf41Q9Y2V0 281 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 USP3Q9Y6I4 520 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 SYNJ2BP-COX16A0A087WUM0 186 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 TRDMT1O14717 391 aaKnown RBP20.73■□□□□ 0.91
EBF1-202ENST00000380654 DIAPH2O60879 1101 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 CYP2C9P11712 490 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 GIMAP7Q8NHV1 300 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 GTF3C2Q8WUA4 911 aaPredicted RBP20.73■□□□□ 0.91
EBF1-202ENST00000380654 MIPEPQ99797 713 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 NOP53Q9NZM5 478 aaKnown RBP20.73■□□□□ 0.91
EBF1-202ENST00000380654 COX16Q9P0S2 106 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 PLLPQ9Y342 182 aa20.73■□□□□ 0.91
EBF1-202ENST00000380654 CCDC195A0A1B0GUA6 201 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 FAM237BA0A1B0GVD1 139 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 ZNF487B1APH4 448 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 CLDN5O00501 218 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 IGFBP6P24592 240 aaPredicted RBP20.72■□□□□ 0.91
EBF1-202ENST00000380654 GRB14Q14449 540 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 TTC7BQ86TV6 843 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 GSDMBQ8TAX9 411 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 N4BP2L2Q92802 583 aaPredicted RBP20.72■□□□□ 0.91
EBF1-202ENST00000380654 FAM149B1Q96BN6 582 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 SNX25Q9H3E2 840 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 ABHD16BQ9H3Z7 469 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 PCMTD2Q9NV79 361 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 SLC5A4Q9NY91 659 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.72■□□□□ 0.91
EBF1-202ENST00000380654 RRN3P2A6NIE6 340 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 SMAD1Q15797 465 aaKnown RBP20.72■□□□□ 0.91
EBF1-202ENST00000380654 DEFB106AQ8N104 65 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 LRRC39Q96DD0 335 aa20.72■□□□□ 0.91
EBF1-202ENST00000380654 OXNAD1Q96HP4 312 aaPredicted RBP20.72■□□□□ 0.91
EBF1-202ENST00000380654 FAM159BA6NKW6 160 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 MFSD11O43934 449 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 BEST1O76090 585 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 MYL2P10916 166 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 TPSB2P20231 275 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 NR2C2P49116 596 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 RPL34P49207 117 aaKnown RBP20.71■□□□□ 0.91
EBF1-202ENST00000380654 ADIGQ0VDE8 80 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 TPSAB1Q15661 275 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 APBB1IPQ7Z5R6 666 aaPredicted RBP20.71■□□□□ 0.91
EBF1-202ENST00000380654 PIGZQ86VD9 579 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 OSTM1Q86WC4 334 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 APPL2Q8NEU8 664 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 HTR3CQ8WXA8 447 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 SKA1Q96BD8 255 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 DOCK3Q8IZD9 2030 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 TRAFD1O14545 582 aaPredicted RBP20.71■□□□□ 0.91
EBF1-202ENST00000380654 HAUS5O94927 633 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 ZFXP17010 805 aaPredicted RBP20.71■□□□□ 0.91
EBF1-202ENST00000380654 ACAT1P24752 427 aaKnown RBP20.71■□□□□ 0.91
EBF1-202ENST00000380654 PTPN4P29074 926 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 SULT1E1P49888 294 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 RABGGTBP53611 331 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 CDK16Q00536 496 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 NBPF20Q3BBV1 942 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 DCAF6Q58WW2 860 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 ANKRD20A2Q5SQ80 823 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 ANKRD20A1Q5TYW2 823 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 ANKRD20A3Q5VUR7 823 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 DPY19L2Q6NUT2 758 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 ARRDC4Q8NCT1 418 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 KCNV2Q8TDN2 545 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 OLFM3Q96PB7 478 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 YY1AP1Q9H869 796 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 SAR1AQ9NR31 198 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 MORF4L1Q9UBU8 362 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 GTF2IRD1Q9UHL9 959 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 PCDHA11Q9Y5I1 949 aa20.71■□□□□ 0.91
EBF1-202ENST00000380654 WDR27A2RRH5 827 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 PEX11AO75192 247 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 DGKIO75912 1065 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 NDUFV1P49821 464 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 RASSF2P50749 326 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 ZBTB16Q05516 673 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 BST1Q10588 318 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 SEMA5AQ13591 1074 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 SPDYAQ5MJ70 313 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 OTUD1Q5VV17 481 aaPredicted RBP20.7■□□□□ 0.9
EBF1-202ENST00000380654 TFB1MQ8WVM0 346 aaKnown RBP20.7■□□□□ 0.9
EBF1-202ENST00000380654 ARHGEF4Q9NR80 690 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 CACNG4Q9UBN1 327 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 LNPEPQ9UIQ6 1025 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 FZD10Q9ULW2 581 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 KRT38O76015 456 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 TGDSO95455 350 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 ELF1P32519 619 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 CCNFP41002 786 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 MATKP42679 507 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 LGSNQ5TDP6 509 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 IQSEC1Q6DN90 963 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 CASC4Q6P4E1 433 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 TP53INP2Q8IXH6 220 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 ADGRF2Q8IZF7 708 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 NDUFAF2Q8N183 169 aa20.7■□□□□ 0.9
EBF1-202ENST00000380654 PDCD7Q8N8D1 485 aaKnown RBP20.7■□□□□ 0.9
EBF1-202ENST00000380654 DEPDC1BQ8WUY9 529 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms