RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ZNF333Q96JL9 665 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 NMRK1Q9NWW6 199 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 TAGLN3Q9UI15 199 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 MCM3APO60318 1980 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 A6NHS1 94 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 SPECC1L-ADORA2AF8WAN1 911 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 H3BRJ5 948 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 SNNO75324 88 aaPredicted RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 TFE3P19532 575 aaPredicted RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 CPA2P48052 419 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 RAP1GDS1P52306 607 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 MRPS35P82673 323 aaKnown RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 NBPF20Q3BBV1 942 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 MTHFD1LQ6UB35 978 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 KYAT3Q6YP21 454 aaKnown RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 C7orf31Q8N865 590 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 WDR60Q8WVS4 1066 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 TRIM56Q9BRZ2 755 aaKnown RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 ZNF395Q9H8N7 513 aaPredicted RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 THAP1Q9NVV9 213 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 MOCS1Q9NZB8 636 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 MARCOQ9UEW3 520 aaPredicted RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 DERAQ9Y315 318 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 HBS1LQ9Y450 684 aaKnown RBP16.86■□□□□ 0.29
VPS16-203ENST00000380469 COL1A2P08123 1366 aa16.86■□□□□ 0.29
VPS16-203ENST00000380469 ZSWIM8A7E2V4 1837 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 HMX2A2RU54 273 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 PDHA1P08559 390 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 FDFT1P37268 417 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 WASHC5Q12768 1159 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 THOC5Q13769 683 aaKnown RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 RCN2Q14257 317 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 DCAF4L1Q3SXM0 396 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 HSF5Q4G112 596 aaPredicted RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 C6orf163Q5TEZ5 329 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 CASC4Q6P4E1 433 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 UNC93AQ86WB7 457 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 TREML1Q86YW5 311 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 SULF1Q8IWU6 871 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 CCDC33Q8N5R6 958 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 PPFIBP2Q8ND30 876 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 TFB1MQ8WVM0 346 aaKnown RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 CENPIQ92674 756 aaPredicted RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 DCPSQ96C86 337 aaKnown RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 CSPG4P5Q96PW8 444 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 PLEKHA5Q9HAU0 1116 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 ARHGEF4Q9NR80 690 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 STX18Q9P2W9 335 aaKnown RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 CIB2O75838 187 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 GABBR2O75899 941 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 GRIA1P42261 906 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 KLC1Q07866 573 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 DBN1Q16643 649 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 GJC2Q5T442 439 aaPredicted RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 STXBP5Q5T5C0 1151 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 CES4AQ5XG92 561 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 LRRC74BQ6ZQY2 392 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 ARMCX2Q7L311 632 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 SLC26A9Q7LBE3 791 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 HTR3CQ8WXA8 447 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 SCG3Q8WXD2 468 aaKnown RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 CDKL2Q92772 493 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 KCTD15Q96SI1 283 aaPredicted RBP16.85■□□□□ 0.29
VPS16-203ENST00000380469 CITO14578 2027 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 SRCAPQ6ZRS2 3230 aa16.85■□□□□ 0.29
VPS16-203ENST00000380469 WDR27A2RRH5 827 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 SDR42E2A6NKP2 422 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 EIF4E1BA6NMX2 242 aaKnown RBP16.84■□□□□ 0.29
VPS16-203ENST00000380469 HACD1B0YJ81 288 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 NPTXRO95502 500 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 CYP2C8P10632 490 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 SKIP12755 728 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 MLNP12872 115 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 LCP1P13796 627 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 ATXN1P54253 815 aaKnown RBP16.84■□□□□ 0.29
VPS16-203ENST00000380469 ALDH18A1P54886 795 aaKnown RBP16.84■□□□□ 0.29
VPS16-203ENST00000380469 KDSRQ06136 332 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 DNAL1Q4LDG9 190 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 ARHGAP17Q68EM7 881 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 ADGRF2Q8IZF7 708 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 DTX3LQ8TDB6 740 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 ACMSDQ8TDX5 336 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 ATP2A3Q93084 1043 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 SIKE1Q9BRV8 207 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 C11orf84Q9BUA3 381 aaPredicted RBP16.84■□□□□ 0.29
VPS16-203ENST00000380469 DTLQ9NZJ0 730 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 MORF4L1Q9UBU8 362 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 ZNF212Q9UDV6 495 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 F8W8V4 182 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 TBX10O75333 385 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 STK10O94804 968 aaKnown RBP16.84■□□□□ 0.29
VPS16-203ENST00000380469 ZNF286BP0CG31 522 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 AMPD1P23109 780 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 ARL4AP40617 200 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 IRX4P78413 519 aa16.84■□□□□ 0.29
VPS16-203ENST00000380469 BST2Q10589 180 aaKnown RBP16.84■□□□□ 0.29
VPS16-203ENST00000380469 FASTKD1Q53R41 847 aaKnown RBP16.84■□□□□ 0.29
VPS16-203ENST00000380469 MDH1BQ5I0G3 518 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms