RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 KREMEN1Q96MU8 473 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 FBXO44Q9H4M3 255 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 UBE2TQ9NPD8 197 aaPredicted RBP4.89□□□□□ -1.63
C9orf72-203ENST00000380003 CYLDQ9NQC7 956 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 MMP17Q9ULZ9 603 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 SCML2Q9UQR0 700 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 NUP205Q92621 2012 aa4.89□□□□□ -1.63
C9orf72-203ENST00000380003 E2F8A0AVK6 867 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 FAM92AA1XBS5 289 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 KCNJ18B7U540 433 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 CDX4O14627 284 aaPredicted RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 STAU1O95793 577 aaKnown RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 EPHX1P07099 455 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 VAV1P15498 845 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SLC6A4P31645 630 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 METAP1P53582 386 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SNRPFP62306 86 aaKnown RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 FOXC1Q12948 553 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 ELF2Q15723 593 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 FUT11Q495W5 492 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 USP39Q53GS9 565 aaKnown RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 N4BP2L1Q5TBK1 243 aaPredicted RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SH3PXD2AQ5TCZ1 1133 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 UNC93AQ86WB7 457 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SIX6OS1Q8N1H7 587 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 DEFB124Q8NES8 71 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 LMO3Q8TAP4 145 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SNX19Q92543 992 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 MRGPRX1Q96LB2 322 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 GSDMAQ96QA5 445 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 FAM126AQ9BYI3 521 aaPredicted RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 IL21RQ9HBE5 538 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 ABCB8Q9NUT2 735 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 CGNQ9P2M7 1197 aaKnown RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 GOLGA8CPA6NN73 597 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 O00370 1275 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 PSMA7O14818 248 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 ENDOD1O94919 500 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 TFE3P19532 575 aaPredicted RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 PRKCHP24723 683 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 CD70P32970 193 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 CTSOP43234 321 aaPredicted RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 NOVA1P51513 510 aaKnown RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 AP3M2P53677 418 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 CLDN6P56747 220 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 LMNB2Q03252 620 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 ZNF33AQ06730 810 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 EDRF1Q3B7T1 1238 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 DPCR1Q3MIW9 517 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SGO2Q562F6 1265 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 FYB2Q5VWT5 728 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 DENND1BQ6P3S1 775 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 WDR5BQ86VZ2 330 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SLC41A1Q8IVJ1 513 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 TRIML1Q8N9V2 468 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 ANKRD52Q8NB46 1076 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SPATA20Q8TB22 786 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 IPO4Q8TEX9 1081 aaKnown RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 TSG101Q99816 390 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 GPR174Q9BXC1 333 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 NUCKS1Q9H1E3 243 aaKnown RBP4.88□□□□□ -1.63
C9orf72-203ENST00000380003 IL37Q9NZH6 218 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 SNX10Q9Y5X0 201 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 USP3Q9Y6I4 520 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 PIEZO2Q9H5I5 2752 aa4.88□□□□□ -1.63
C9orf72-203ENST00000380003 BCLAF3A2AJT9 711 aaKnown RBP4.87□□□□□ -1.63
C9orf72-203ENST00000380003 C1QTNF9BB2RNN3 333 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 SMC2O95347 1197 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 MYL1P05976 194 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 FYNP06241 537 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 ZNF806P0C7X5 589 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 C1QTNF9P0C862 333 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 CHRM1P11229 460 aaPredicted RBP4.87□□□□□ -1.63
C9orf72-203ENST00000380003 ACSL1P33121 698 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 MAGEA9P43362 315 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 KLK7P49862 253 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 IRAK1P51617 712 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 MFAP3P55082 362 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 NUCB2P80303 420 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 IL9RQ01113 521 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 MAP7D1Q3KQU3 841 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 FBXO43Q4G163 708 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 RAB6CQ53S08 254 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 PMS2CLQ68D20 193 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 SERPINA13PQ6UXR4 307 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 HTR3DQ70Z44 454 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 DNAAF5Q86Y56 855 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 TMPRSS6Q8IU80 811 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 SYNPOQ8N3V7 929 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 CAMKK1Q8N5S9 505 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 RBBP8NLQ8NC74 664 aaPredicted RBP4.87□□□□□ -1.63
C9orf72-203ENST00000380003 PDZD8Q8NEN9 1154 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 MAGEB5Q9BZ81 275 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 RAB6CQ9H0N0 254 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 TBC1D14Q9P2M4 693 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 HESX1Q9UBX0 185 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.87□□□□□ -1.63
C9orf72-203ENST00000380003 STON1Q9Y6Q2 735 aa4.87□□□□□ -1.63
C9orf72-203ENST00000380003 ATP8B3O60423 1300 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms