RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 SCML4Q8N228 414 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 TRIML1Q8N9V2 468 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 EHBP1Q8NDI1 1231 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 KCNV2Q8TDN2 545 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 PLD4Q96BZ4 506 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 GABRG3Q99928 467 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 SLC6A17Q9H1V8 727 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 VPS45Q9NRW7 570 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 CACNA2D2Q9NY47 1150 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 CALCOCO1Q9P1Z2 691 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 CNTN6Q9UQ52 1028 aa18.68■□□□□ 0.58
COMMD6-202ENST00000377612 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.68■□□□□ 0.58
COMMD6-202ENST00000377612 PATE3B3GLJ2 98 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 ALDH1A2O94788 518 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 CNGA2Q16280 664 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 MSANTD2Q6P1R3 559 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 IRF2BP1Q8IU81 584 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 CPXM2Q8N436 756 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 C12orf50Q8NA57 414 aaPredicted RBP18.67■□□□□ 0.58
COMMD6-202ENST00000377612 IPO9Q96P70 1041 aaKnown RBP18.67■□□□□ 0.58
COMMD6-202ENST00000377612 ACP6Q9NPH0 428 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 CNGB3Q9NQW8 809 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 BCCIPQ9P287 314 aaKnown RBP eCLIP18.67■□□□□ 0.58
COMMD6-202ENST00000377612 AJAP1Q9UKB5 411 aaPredicted RBP18.67■□□□□ 0.58
COMMD6-202ENST00000377612 KIAA1257Q9ULG3 409 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 STRIP2Q9ULQ0 834 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 ZNF510Q9Y2H8 683 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 SLC27A6Q9Y2P4 619 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 PLXNA2O75051 1894 aa18.67■□□□□ 0.58
COMMD6-202ENST00000377612 WASH3PC4AMC7 463 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 GNA14O95837 355 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 NDUFV2P19404 249 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 HOXD9P28356 352 aaPredicted RBP18.66■□□□□ 0.58
COMMD6-202ENST00000377612 PTGER3P43115 390 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 SGSHP51688 502 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 LIMK1P53667 647 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 PREPLQ4J6C6 727 aaPredicted RBP18.66■□□□□ 0.58
COMMD6-202ENST00000377612 ARMCX6Q7L4S7 300 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 TRMT11Q7Z4G4 463 aaKnown RBP18.66■□□□□ 0.58
COMMD6-202ENST00000377612 CHPFQ8IZ52 775 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 IPO4Q8TEX9 1081 aaKnown RBP18.66■□□□□ 0.58
COMMD6-202ENST00000377612 PIWIL1Q96J94 861 aaKnown RBP18.66■□□□□ 0.58
COMMD6-202ENST00000377612 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 DCLK3Q9C098 648 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 CHMP5Q9NZZ3 219 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 CYTH4Q9UIA0 394 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 RWDD2AQ9UIY3 292 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 ATXN2Q99700 1313 aaKnown RBP18.66■□□□□ 0.58
COMMD6-202ENST00000377612 DOCK4Q8N1I0 1966 aa18.66■□□□□ 0.58
COMMD6-202ENST00000377612 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 LNP1A1A4G5 178 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 BECN2A8MW95 431 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 TM4SF5O14894 197 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 CAVIN2O95810 425 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 IGLV3-27P01718 113 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 FYNP06241 537 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 CHKAP35790 457 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 STPG1Q5TH74 334 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 TMEM215Q68D42 235 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 DENND1BQ6P3S1 775 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 CYP2U1Q7Z449 544 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 TMEFF1Q8IYR6 380 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 OLA1Q9NTK5 396 aaKnown RBP18.65■□□□□ 0.58
COMMD6-202ENST00000377612 STOML2Q9UJZ1 356 aa18.65■□□□□ 0.58
COMMD6-202ENST00000377612 HBS1LQ9Y450 684 aaKnown RBP18.65■□□□□ 0.58
COMMD6-202ENST00000377612 FOXD2O60548 495 aaPredicted RBP18.64■□□□□ 0.57
COMMD6-202ENST00000377612 SLC9A1P19634 815 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 IL12RB1P42701 662 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 RPL34P49207 117 aaKnown RBP18.64■□□□□ 0.57
COMMD6-202ENST00000377612 DHPSP49366 369 aaPredicted RBP18.64■□□□□ 0.57
COMMD6-202ENST00000377612 CETN1Q12798 172 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 PPM1JQ5JR12 505 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 TRIM65Q6PJ69 517 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 C11orf74Q86VG3 221 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 PGBD3Q8N328 593 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 SORCS1Q8WY21 1168 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 SPACA7Q96KW9 195 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 EDEM2Q9BV94 578 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 CLSTN2Q9H4D0 955 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 ABCC13Q9NSE7 274 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 STON1Q9Y6Q2 735 aa18.64■□□□□ 0.57
COMMD6-202ENST00000377612 TPRP12270 2363 aaKnown RBP18.64■□□□□ 0.57
COMMD6-202ENST00000377612 MAP1BP46821 2468 aaKnown RBP18.64■□□□□ 0.57
COMMD6-202ENST00000377612 IGHV1OR15-9A0A0B4J2B8 117 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 TSPAN3O60637 253 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 LTFP02788 710 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 KRT5P13647 590 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 GPD2P43304 727 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 ENPP2Q13822 863 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 STILQ15468 1287 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 FAM133BQ5BKY9 247 aaKnown RBP18.63■□□□□ 0.57
COMMD6-202ENST00000377612 ANKS1BQ7Z6G8 1248 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 WFDC5Q8TCV5 224 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 RNF139Q8WU17 664 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 IRGQQ8WZA9 623 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 MYEOVQ96EZ4 313 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 MIS12Q9H081 205 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 UBE2TQ9NPD8 197 aaPredicted RBP18.63■□□□□ 0.57
COMMD6-202ENST00000377612 TMEM74BQ9NUR3 256 aa18.63■□□□□ 0.57
COMMD6-202ENST00000377612 THAP10Q9P2Z0 257 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms