RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 UPK3BL1B0FP48 263 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 WASH3PC4AMC7 463 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 UPK3BL2E5RIL1 263 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 ZBED1O96006 694 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 TKTL1P51854 596 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 BCAT1P54687 386 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 MCCD1P59942 119 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-202ENST00000376610 ARID5AQ03989 594 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 EIF4HQ15056 248 aaKnown RBP19.36■□□□□ 0.69
HDAC6-202ENST00000376610 RAB41Q5JT25 222 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 SLC41A1Q8IVJ1 513 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 MINDY1Q8N5J2 469 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 DDI1Q8WTU0 396 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 ZNF419Q96HQ0 510 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-202ENST00000376610 IPO9Q96P70 1041 aaKnown RBP19.36■□□□□ 0.69
HDAC6-202ENST00000376610 ARID3AQ99856 593 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 SLC6A17Q9H1V8 727 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 LRRC4Q9HBW1 653 aa19.36■□□□□ 0.69
HDAC6-202ENST00000376610 AGO1Q9UL18 857 aaKnown RBP19.36■□□□□ 0.69
HDAC6-202ENST00000376610 GOLGA6L4A6NEF3 574 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 MEI4A8MW99 385 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 SLC16A3O15427 465 aaKnown RBP19.35■□□□□ 0.69
HDAC6-202ENST00000376610 CD6P30203 668 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 HARS2P49590 506 aaKnown RBP19.35■□□□□ 0.69
HDAC6-202ENST00000376610 SIM1P81133 766 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-202ENST00000376610 SEMA3BQ13214 749 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 GOLGA7BQ2TAP0 167 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 PLEKHG6Q3KR16 790 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 FUT11Q495W5 492 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 SGO2Q562F6 1265 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 METTL3Q86U44 580 aaKnown RBP19.35■□□□□ 0.69
HDAC6-202ENST00000376610 CPXM2Q8N436 756 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 RNF139Q8WU17 664 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 TATDN2Q93075 761 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 SCNM1Q9BWG6 230 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 SLC2A11Q9BYW1 496 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 FSCN3Q9NQT6 498 aa19.35■□□□□ 0.69
HDAC6-202ENST00000376610 THAP10Q9P2Z0 257 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-202ENST00000376610 C1QTNF9BB2RNN3 333 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 XPO1O14980 1071 aaKnown RBP19.34■□□□□ 0.69
HDAC6-202ENST00000376610 SMC2O95347 1197 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 C1QTNF9P0C862 333 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 CD19P15391 556 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 SPINK2P20155 84 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 IL12RB1P42701 662 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 FKBP3Q00688 224 aaKnown RBP19.34■□□□□ 0.69
HDAC6-202ENST00000376610 BST2Q10589 180 aaKnown RBP19.34■□□□□ 0.69
HDAC6-202ENST00000376610 PNOCQ13519 176 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 CUL2Q13617 745 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 HNRNPDQ14103 355 aaKnown RBP19.34■□□□□ 0.69
HDAC6-202ENST00000376610 GEN1Q17RS7 908 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 PIP4P1Q86T03 277 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 SIX6OS1Q8N1H7 587 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 GTPBP4Q9BZE4 634 aaKnown RBP19.34■□□□□ 0.69
HDAC6-202ENST00000376610 ULBP1Q9BZM6 244 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 CIPCQ9C0C6 399 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 ELOVL2Q9NXB9 296 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 TSPAN16Q9UKR8 245 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 FAM208BQ5VWN6 2430 aa19.34■□□□□ 0.69
HDAC6-202ENST00000376610 PCDH15Q96QU1 1955 aa19.33■□□□□ 0.69
HDAC6-202ENST00000376610 FRYQ5TBA9 3013 aa19.33■□□□□ 0.69
HDAC6-202ENST00000376610 TMEM8BA6NDV4 472 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 H0Y626 953 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 TIMM44O43615 452 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 TRIM16O95361 564 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 ACADMP11310 421 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 OXTRP30559 389 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 ZNF445P59923 1031 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 PDE4CQ08493 712 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 MPPE1Q53F39 396 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 ZNF658Q5TYW1 1059 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-202ENST00000376610 PM20D1Q6GTS8 502 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 TMPRSS6Q8IU80 811 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 FMNL3Q8IVF7 1028 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 PRCCQ92733 491 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-202ENST00000376610 SIPA1Q96FS4 1042 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 TOE1Q96GM8 510 aaKnown RBP19.33■□□□□ 0.68
HDAC6-202ENST00000376610 PIWIL1Q96J94 861 aaKnown RBP19.33■□□□□ 0.68
HDAC6-202ENST00000376610 GSDMAQ96QA5 445 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 GDPD2Q9HCC8 539 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 HOOK1Q9UJC3 728 aaKnown RBP19.33■□□□□ 0.68
HDAC6-202ENST00000376610 WASF3Q9UPY6 502 aa19.33■□□□□ 0.68
HDAC6-202ENST00000376610 HBS1LQ9Y450 684 aaKnown RBP19.33■□□□□ 0.68
HDAC6-202ENST00000376610 SPAARA0A1B0GVQ0 90 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 TBXAS1P24557 533 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-202ENST00000376610 PRCPP42785 496 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 ADIGQ0VDE8 80 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 SLC14A1Q13336 389 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 CBWD6Q4V339 395 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 CBWD3Q5JTY5 395 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 CBWD5Q5RIA9 395 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 SERPINA13PQ6UXR4 307 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 GPR174Q9BXC1 333 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 ZDHHC5Q9C0B5 715 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 MKRN2Q9H000 416 aaKnown RBP19.32■□□□□ 0.68
HDAC6-202ENST00000376610 CD93Q9NPY3 652 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 ITM2CQ9NQX7 267 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 DNAAF2Q9NVR5 837 aaKnown RBP19.32■□□□□ 0.68
HDAC6-202ENST00000376610 ARMCX3Q9UH62 379 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-202ENST00000376610 KIAA1257Q9ULG3 409 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms