RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 RPL7AP62424 266 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 XIAPP98170 497 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 TLR1Q15399 786 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 ZACNQ401N2 412 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 C1orf228Q6PIY5 440 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 DPP9Q86TI2 863 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 THNSL1Q8IYQ7 743 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 SHCBP1Q8NEM2 672 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 SNRNP27Q8WVK2 155 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 RILPQ96NA2 401 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 GCNAQ96QF7 691 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 MPHOSPH6Q99547 160 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 ACO2Q99798 780 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 INO80BQ9C086 356 aaPredicted RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 C20orf27Q9GZN8 174 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 RBM38Q9H0Z9 239 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 hCG_1818297A0A087WSY0 165 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 ASB14A6NK59 587 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 CYB561D2O14569 222 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 COPEO14579 308 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 MAGEB3O15480 346 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 FAM155BO75949 473 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 PIGRP01833 764 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 KBTBD12Q3ZCT8 623 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 IER5Q5VY09 327 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 PLEKHA7Q6IQ23 1121 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 POU5F2Q8N7G0 328 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 SLC44A1Q8WWI5 657 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 GAB3Q8WWW8 586 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 CCDC124Q96CT7 223 aaKnown RBP13.36□□□□□ -0.27
MSH5-204ENST00000375755 NUB1Q9Y5A7 615 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 PCDHB2Q9Y5E7 798 aa13.36□□□□□ -0.27
MSH5-204ENST00000375755 CCNT2O60583 730 aaKnown RBP13.35□□□□□ -0.27
MSH5-204ENST00000375755 CLPTM1O96005 669 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 SMPD1P17405 629 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 PCSK6P29122 969 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 CLDN10P78369 228 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 SULT2A1Q06520 285 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 TMED1Q13445 227 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 CHI3L2Q15782 390 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 GRAMD1BQ3KR37 738 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 TEX44Q53QW1 395 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 ZFP28Q8NHY6 868 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 E2F7Q96AV8 911 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 SMARCAD1Q9H4L7 1026 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 TMEM134Q9H6X4 195 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 MRPL47Q9HD33 250 aaKnown RBP13.35□□□□□ -0.27
MSH5-204ENST00000375755 UBAP1Q9NZ09 502 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 TCRBV9S1A1TA0A576 114 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 CAPN8A6NHC0 703 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 C22orf31O95567 290 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 INHBAP08476 426 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 RAG1P15918 1043 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 ZNF200P98182 395 aaPredicted RBP13.35□□□□□ -0.27
MSH5-204ENST00000375755 MYLK3Q32MK0 819 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 PCGF5Q86SE9 256 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 TRIM42Q8IWZ5 723 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 SLC35B2Q8TB61 432 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 PIP4K2CQ8TBX8 421 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 CPB2Q96IY4 423 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 FAM167AQ96KS9 214 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 GRIP2Q9C0E4 1043 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 IQCGQ9H095 443 aaKnown RBP13.35□□□□□ -0.27
MSH5-204ENST00000375755 IKBKGQ9Y6K9 419 aa13.35□□□□□ -0.27
MSH5-204ENST00000375755 H0YCG3 227 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 HNRNPCP07910 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
MSH5-204ENST00000375755 SERPINA6P08185 405 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 RPL22P35268 128 aaKnown RBP13.34□□□□□ -0.27
MSH5-204ENST00000375755 NOMO3P69849 1222 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 GCNT1Q02742 428 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 TBCCQ15814 346 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 EFCAB3Q8N7B9 438 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 ARL10Q8N8L6 244 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 FEZF2Q8TBJ5 459 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 IRGQQ8WZA9 623 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 MAML3Q96JK9 1138 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 HBS1LQ9Y450 684 aaKnown RBP13.34□□□□□ -0.27
MSH5-204ENST00000375755 A0A087WZ62 844 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 SDR42E2A6NKP2 422 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 TRIM49D1C9J1S8 452 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 AOC1P19801 751 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 PMLP29590 882 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 SERPINB6P35237 376 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 FDFT1P37268 417 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 ELK3P41970 407 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 DYNLT1P63172 113 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 CCNA1P78396 465 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 CYLC2Q14093 348 aaPredicted RBP13.34□□□□□ -0.27
MSH5-204ENST00000375755 ANKRD23Q86SG2 305 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 C2orf69Q8N8R5 385 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 ICA1LQ8NDH6 482 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 BTBD9Q96Q07 612 aa13.34□□□□□ -0.27
MSH5-204ENST00000375755 FDXACB1Q9BRP7 624 aaPredicted RBP13.34□□□□□ -0.27
MSH5-204ENST00000375755 C16orf70Q9BSU1 422 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms