RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 RTCAO00442 366 aaKnown RBP4.76□□□□□ -1.65
SCN1A-202ENST00000375405 ZNF500O60304 480 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-202ENST00000375405 GFPT2O94808 682 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 DEXIO95424 95 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 TOP3BO95985 862 aaKnown RBP4.76□□□□□ -1.65
SCN1A-202ENST00000375405 RPS2P15880 293 aaKnown RBP4.76□□□□□ -1.65
SCN1A-202ENST00000375405 HNRNPH1P31943 449 aaKnown RBP4.76□□□□□ -1.65
SCN1A-202ENST00000375405 NT5C2P49902 561 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 SELENOVP59797 346 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 CDK17Q00537 523 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 FSTL1Q12841 308 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 GRIK3Q13003 919 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 SEC23AQ15436 765 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 CDKL4Q5MAI5 379 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 CHERPQ8IWX8 916 aaKnown RBP4.76□□□□□ -1.65
SCN1A-202ENST00000375405 CENPLQ8N0S6 344 aaPredicted RBP4.76□□□□□ -1.65
SCN1A-202ENST00000375405 CDYL2Q8N8U2 506 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 C16orf58Q96GQ5 468 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 SNF8Q96H20 258 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 ANKRD27Q96NW4 1050 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 GOLPH3LQ9H4A5 285 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 PLEKHA3Q9HB20 300 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 HAO2Q9NYQ3 351 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 BFARQ9NZS9 450 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 STAP1Q9ULZ2 295 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 KIAA1024Q9UPX6 916 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 TAF6LQ9Y6J9 622 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 AK5Q9Y6K8 562 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 NCKAP5LQ9HCH0 1330 aa4.76□□□□□ -1.65
SCN1A-202ENST00000375405 RNF113AO15541 343 aaKnown RBP4.75□□□□□ -1.65
SCN1A-202ENST00000375405 AVILO75366 819 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 MICAL2O94851 1124 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 TNFAIP8O95379 198 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 CLEC3BP05452 202 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 SLC2A1P11166 492 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 CD53P19397 219 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PRKCHP24723 683 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PHKA2P46019 1235 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PRKAG1P54619 331 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 OC90Q02509 493 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-202ENST00000375405 MROH9Q5TGP6 573 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PPP2R2DQ66LE6 453 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ZNF554Q86TJ5 538 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 IFNL3Q8IZI9 196 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ARMC10Q8N2F6 343 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 TSPYL6Q8N831 410 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 EEF1AKMT1Q8WVE0 214 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 OVCA2Q8WZ82 227 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 MTMR8Q96EF0 704 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 KIF12Q96FN5 646 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 GSDMCQ9BYG8 508 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 RIBC2Q9H4K1 309 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ACAD9Q9H845 621 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 BTG4Q9NY30 223 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 GPSM3Q9Y4H4 160 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 MYH9P35579 1960 aaKnown RBP4.75□□□□□ -1.65
SCN1A-202ENST00000375405 CDK2AP1O14519 115 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PLD2O14939 933 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 CLDN3O15551 220 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 RGS14O43566 566 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 SSX5O60225 188 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 SUPT7LO94864 414 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 HAUS5O94927 633 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 SFNP31947 248 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ZBED6P86452 979 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PTPN20Q4JDL3 420 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 INTS11Q5TA45 600 aaKnown RBP4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ALG1LQ6GMV1 187 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-202ENST00000375405 UTS2BQ765I0 119 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PTPRN2Q92932 1015 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 S100PBPQ96BU1 408 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ACCSQ96QU6 501 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ZSCAN10Q96SZ4 725 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-202ENST00000375405 CLPBQ9H078 707 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ATG10Q9H0Y0 220 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 CIDEBQ9UHD4 219 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 CAMSAP2Q08AD1 1489 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 TEX51A0A1B0GUA7 166 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PSMD11O00231 422 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 ZBTB39O15060 712 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 SHOXO15266 292 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PSTPIP1O43586 416 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 KCNJ13O60928 360 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 MED24O75448 989 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 TNFRSF21O75509 655 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 DGKIO75912 1065 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 INMTO95050 263 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 RPL7P18124 248 aaKnown RBP4.75□□□□□ -1.65
SCN1A-202ENST00000375405 MLLT6P55198 1093 aaPredicted RBP4.75□□□□□ -1.65
SCN1A-202ENST00000375405 RAB5BP61020 215 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 VPS26BQ4G0F5 336 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 SPIN3Q5JUX0 258 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 NYAP1Q6ZVC0 841 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PID1Q7Z2X4 250 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 EXOC3L1Q86VI1 746 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 NPLOC4Q8TAT6 608 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 MYRFLQ96LU7 910 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 PANX2Q96RD6 677 aa4.75□□□□□ -1.65
SCN1A-202ENST00000375405 CKLFQ9UBR5 152 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms