RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ARRDC4Q8NCT1 418 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 FDXACB1Q9BRP7 624 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 TMEM79Q9BSE2 394 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 MTIF3Q9H2K0 278 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 SPASTQ9UBP0 616 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 PDZK1P1A8MUH7 402 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 GZMAP12544 262 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 FKBP1BP68106 108 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 MCL1Q07820 350 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 TRIM25Q14258 630 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 GRIK4Q16099 956 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 CYP51A1Q16850 503 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 IQSEC1Q6DN90 963 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 RAD23AP54725 363 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 PDK2Q15119 407 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 KHDRBS2Q5VWX1 349 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 OTOAQ7RTW8 1153 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 ATXN2LQ8WWM7 1075 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 OSBPL10Q9BXB5 764 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 SPATA16Q9BXB7 569 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 LRRC40Q9H9A6 602 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 SYTL2Q9HCH5 934 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 RNF112Q9ULX5 631 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 C15orf41Q9Y2V0 281 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 NFASCO94856 1347 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 LINC00854A0A1B0GVQ3 168 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 E9PBE3 544 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 KLHL41O60662 606 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 EPHB2P29323 1055 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 TTLL9Q3SXZ7 439 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 SNX30Q5VWJ9 437 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 C1orf186Q6ZWK4 172 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 FAM9CQ8IZT9 166 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 TAS1R2Q8TE23 839 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 ZSCAN32Q9NX65 697 aa12.61□□□□□ -0.39
NPLOC4-202ENST00000374747 CNOT3O75175 753 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ZNF286BP0CG31 522 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 NCAM1P13591 858 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ATP6V1B2P21281 511 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 PSMA3P25788 255 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 NCF4Q15080 339 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 C11orf63Q6NUN7 778 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 SV2AQ7L0J3 742 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 FGD2Q7Z6J4 655 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 C19orf60Q96EN9 201 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ZFRQ96KR1 1074 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 RAB21Q9UL25 225 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 PMPCBO75439 489 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 CYP11B1P15538 503 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 RRM2P31350 389 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 PWP1Q13610 501 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 CCNG2Q16589 344 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 HIST2H2ACQ16777 129 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 HIST2H2AA3Q6FI13 130 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 DEFB107AQ8IZN7 70 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 MPP4Q96JB8 637 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ZNF518BQ9C0D4 1074 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 PIDD1Q9HB75 910 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 SMNDC1O75940 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 BCL10O95999 233 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 VDRP11473 427 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 AKR1A1P14550 325 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 UBA1P22314 1058 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 SOX10P56693 466 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 PTENP60484 403 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ST8SIA6P61647 398 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ATP6AP1LQ52LC2 224 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 OR8H2Q8N162 312 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 TNFRSF25Q93038 417 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 BTBD10Q9BSF8 475 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 CYP3A43Q9HB55 503 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 KRT84Q9NSB2 600 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 AAR2Q9Y312 384 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 CPA3P15088 417 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 MAPK1P28482 360 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ETFBP38117 255 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ACVR2BQ13705 512 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 MAP4K3Q8IVH8 894 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 TDRD5Q8NAT2 981 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 KYQ8NBH2 561 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 EXD1Q8NHP7 514 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 MTG1Q9BT17 334 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 NDEL1Q9GZM8 345 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 RNPEPQ9H4A4 650 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 TRPC7Q9HCX4 862 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 NCKIPSDQ9NZQ3 722 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 COPG2Q9UBF2 871 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 DAPK2Q9UIK4 370 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 NR5A2O00482 541 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 TNFAIP8O95379 198 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 ODC1P11926 461 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 SLC16A1P53985 500 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 GALNTL6Q49A17 601 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 TRIM8Q9BZR9 551 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 SLC7A5P2Q9GIP4 190 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 SETD4Q9NVD3 440 aa12.6□□□□□ -0.39
NPLOC4-202ENST00000374747 TMCC3Q9ULS5 477 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms