RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 ABCB6Q9NP58 842 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ASCL3Q9NQ33 180 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 THSD1Q9NS62 852 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ADAMTS1Q9UHI8 967 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
ABCA1-201ENST00000374733 CRYBG3Q68DQ2 2970 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 NEDD8-MDP1E9PL57 170 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 PIRO00625 290 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 DFNA5O60443 496 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 USP12O75317 370 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 PAX3P23760 479 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 TAF6P49848 677 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 PSMA6P60900 246 aaKnown RBP11.3□□□□□ -0.6
ABCA1-201ENST00000374733 MCL1Q07820 350 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 STRN3Q13033 797 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 PDIA5Q14554 519 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 ENOX2Q16206 610 aaKnown RBP11.3□□□□□ -0.6
ABCA1-201ENST00000374733 IGFBP7Q16270 282 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 RIPOR1Q6ZS17 1223 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 DDX42Q86XP3 938 aaKnown RBP eCLIP11.3□□□□□ -0.6
ABCA1-201ENST00000374733 TMPRSS6Q8IU80 811 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 ZNF295-AS1Q8N0V1 137 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 SAP25Q8TEE9 199 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 HAPLN2Q9GZV7 340 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 TSPAN10Q9H1Z9 355 aaPredicted RBP11.3□□□□□ -0.6
ABCA1-201ENST00000374733 OSGEPQ9NPF4 335 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 SPHK2Q9NRA0 654 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
ABCA1-201ENST00000374733 SETD2Q9BYW2 2564 aaPredicted RBP11.29□□□□□ -0.6
ABCA1-201ENST00000374733 ZNF840PA6NDX5 716 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 GFRA2O00451 464 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 SLC16A4O15374 487 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 NEMFO60524 1076 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 FSBPO95073 299 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 OLFM2O95897 454 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 IGLV3-19P01714 112 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
ABCA1-201ENST00000374733 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 CKMT2P17540 419 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 ACSL1P33121 698 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 AFMP43652 599 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 SHBQ15464 509 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 SWI5Q1ZZU3 235 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 SPATA2LQ8IUW3 424 aaPredicted RBP11.29□□□□□ -0.6
ABCA1-201ENST00000374733 BBS7Q8IWZ6 715 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 BIRC7Q96CA5 298 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 OTUB2Q96DC9 234 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 ACE2Q9BYF1 805 aaPredicted RBP11.29□□□□□ -0.6
ABCA1-201ENST00000374733 TRIM9Q9C026 710 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 PCED1AQ9H1Q7 454 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 EPN3Q9H201 632 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 POLR1BQ9H9Y6 1135 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 GJB4Q9NTQ9 266 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 ZDHHC3Q9NYG2 299 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 PLEKHB1Q9UF11 243 aaPredicted RBP11.29□□□□□ -0.6
ABCA1-201ENST00000374733 GTF3C4Q9UKN8 822 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 SH3BP1Q9Y3L3 701 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 USP3Q9Y6I4 520 aa11.29□□□□□ -0.6
ABCA1-201ENST00000374733 SPENQ96T58 3664 aaKnown RBP11.29□□□□□ -0.6
ABCA1-201ENST00000374733 CELSR2Q9HCU4 2923 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 SERTM1A2A2V5 107 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 HIP1RO75146 1068 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 OAS1P00973 400 aaKnown RBP11.28□□□□□ -0.6
ABCA1-201ENST00000374733 CD27P26842 260 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 MSX1P28360 303 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 EPHA8P29322 1005 aaPredicted RBP11.28□□□□□ -0.6
ABCA1-201ENST00000374733 NOS2P35228 1153 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 LSSP48449 732 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 MYL7Q01449 175 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 ST3GAL1Q11201 340 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 KRT32Q14532 448 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 SGO2Q562F6 1265 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 SV2AQ7L0J3 742 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 DAW1Q8N136 415 aa11.28□□□□□ -0.6
ABCA1-201ENST00000374733 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
ABCA1-201ENST00000374733 CPLX1O14810 134 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 SYNCRIPO60506 623 aaKnown RBP11.27□□□□□ -0.61
ABCA1-201ENST00000374733 PPFIA2O75334 1257 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 TYRP14679 529 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 PDIA3P30101 505 aaKnown RBP11.27□□□□□ -0.61
ABCA1-201ENST00000374733 LBRQ14739 615 aaKnown RBP11.27□□□□□ -0.61
ABCA1-201ENST00000374733 ARL13BQ3SXY8 428 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 CFAP221Q4G0U5 840 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 C3orf38Q5JPI3 329 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 DENND5BQ6ZUT9 1274 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 FAM177A1Q8N128 213 aaPredicted RBP11.27□□□□□ -0.61
ABCA1-201ENST00000374733 BICD1Q96G01 975 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 SLC6A18Q96N87 628 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 DEPDC7Q96QD5 511 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 XPO6Q96QU8 1125 aaKnown RBP11.27□□□□□ -0.61
ABCA1-201ENST00000374733 BBS2Q9BXC9 721 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 ZNF232Q9UNY5 417 aa11.27□□□□□ -0.61
ABCA1-201ENST00000374733 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
ABCA1-201ENST00000374733 KIF26BQ2KJY2 2108 aa11.26□□□□□ -0.61
ABCA1-201ENST00000374733 KPNA7A9QM74 516 aa11.26□□□□□ -0.61
ABCA1-201ENST00000374733 VILLO15195 856 aa11.26□□□□□ -0.61
ABCA1-201ENST00000374733 HCRTO43612 131 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms