RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TRIM72Q6ZMU5 477 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 BBOF1Q8ND07 529 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PPP1R14CQ8TAE6 165 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SLC35B2Q8TB61 432 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SPATA18Q8TC71 538 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DCUN1D1Q96GG9 259 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PRICKLE1Q96MT3 831 aaPredicted RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 TAAR1Q96RJ0 339 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 FAM192AQ9GZU8 254 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 TMEM206Q9H813 350 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 INIPQ9NRY2 104 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 RNF19AQ9NV58 838 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 LIMD1Q9UGP4 676 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PLLPQ9Y342 182 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 MFHAS1Q9Y4C4 1052 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SDR42E2A6NKP2 422 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 A8MXQ7 604 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 I3L4J1 428 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 ATP2A1O14983 1001 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 TM9SF1O15321 606 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 XPOTO43592 962 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DKC1O60832 514 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DNAJA2O60884 412 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 LRCH4O75427 683 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 GSRP00390 522 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 FOSP01100 380 aaPredicted RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 C1QAP02745 245 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 ITGAXP20702 1163 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PSMA2P25787 234 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 VARSP26640 1264 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 HSPA1LP34931 641 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 ALDH1A3P47895 512 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 LIG4P49917 911 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 ADARP55265 1226 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 YWHAZP63104 245 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 FOXC1Q12948 553 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PRKG1Q13976 671 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 GSTA3Q16772 222 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 TRMT5Q32P41 509 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 LIN9Q5TKA1 542 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 ITPRIPL1Q6GPH6 555 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PTCRAQ6ISU1 281 aaPredicted RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DARS2Q6PI48 645 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 B3GNT9Q6UX72 402 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 CMC1Q7Z7K0 106 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 LDHDQ86WU2 507 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 C10orf107Q8IVU9 208 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 MAP7D3Q8IWC1 876 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 RAVER1Q8IY67 606 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 RCOR2Q8IZ40 523 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PDIK1LQ8N165 341 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 NAT16Q8N8M0 369 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PNPLA1Q8N8W4 532 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PRR7Q8TB68 274 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PPP4R1Q8TF05 950 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DCAF4Q8WV16 495 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SLC44A1Q8WWI5 657 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 GAB3Q8WWW8 586 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 TEKT1Q969V4 418 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 FAF2Q96CS3 445 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 WNK4Q96J92 1243 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 CEP170P1Q96L14 293 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PEBP4Q96S96 227 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 MIS12Q9H081 205 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 TMX4Q9H1E5 349 aaPredicted RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 GPBP1L1Q9HC44 474 aaPredicted RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 PCDH9Q9HC56 1237 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 RAVER2Q9HCJ3 691 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 XAB2Q9HCS7 855 aaKnown RBP5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SENP1Q9P0U3 644 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SLC9A2Q9UBY0 812 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 HMGXB4Q9UGU5 601 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SOX13Q9UN79 622 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 POLIQ9UNA4 740 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 SHOC2Q9UQ13 582 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 COQ4Q9Y3A0 265 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 DTNAQ9Y4J8 743 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 TTLL3Q9Y4R7 772 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 COMMD3-BMI1R4GMX3 469 aa5.6□□□□□ -1.51
ATG4A-204ENST00000372246 H7C0C1 242 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 ZC3H11AO75152 810 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATG4A-204ENST00000372246 ZNF189O75820 626 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-204ENST00000372246 SERPINB2P05120 415 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 JUNP05412 331 aaKnown RBP5.59□□□□□ -1.51
ATG4A-204ENST00000372246 P4HBP07237 508 aaKnown RBP5.59□□□□□ -1.51
ATG4A-204ENST00000372246 VIL1P09327 827 aaKnown RBP5.59□□□□□ -1.51
ATG4A-204ENST00000372246 SRGAP2CP0DJJ0 459 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 SRGAP2BP0DMP2 458 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 CD19P15391 556 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 XRCC1P18887 633 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-204ENST00000372246 HDCP19113 662 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 TFE3P19532 575 aaPredicted RBP5.59□□□□□ -1.51
ATG4A-204ENST00000372246 RFX1P22670 979 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 ATP2B4P23634 1241 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 EPHA3P29320 983 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 PHBP35232 272 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 DPP6P42658 865 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 QARSP47897 775 aaKnown RBP5.59□□□□□ -1.51
ATG4A-204ENST00000372246 ATP5OP48047 213 aa5.59□□□□□ -1.51
ATG4A-204ENST00000372246 ENTPD1P49961 510 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms