RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 CLIC5Q9NZA1 410 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 CWC15Q9P013 229 aaKnown RBP27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 GMIPQ9P107 970 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 ASIC3Q9UHC3 531 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 SSX2IPQ9Y2D8 614 aa27.29■■□□□ 1.96
ATPAF1-202ENST00000371937 PLXNA3P51805 1871 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 MYO16Q9Y6X6 1858 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 H3BRJ5 948 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 SYN1P17600 705 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 RAB33AQ14088 237 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 PYROXD2Q8N2H3 581 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 ALLCQ8N6M5 410 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 FAM129AQ9BZQ8 928 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 NEU2Q9Y3R4 380 aa27.28■■□□□ 1.96
ATPAF1-202ENST00000371937 IRAK2O43187 625 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 ECHS1P30084 290 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 RPL21P46778 160 aaKnown RBP27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 PGFP49763 221 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 ZNF135P52742 658 aaPredicted RBP27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 EIF3EP60228 445 aaKnown RBP27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 EIF4EBP2Q13542 120 aaPredicted RBP27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 NOMO1Q15155 1222 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 LBHD1Q9BQE6 289 aaPredicted RBP27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 MAGEB5Q9BZ81 275 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 FNIP2Q9P278 1114 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 SLC38A8A6NNN8 435 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 PECAM1P16284 738 aaPredicted RBP27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 ATP2A2P16615 1042 aaKnown RBP27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 GOT1P17174 413 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 ATF6P18850 670 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 TAF10Q12962 218 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 KCTD19Q17RG1 926 aaPredicted RBP27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 BRMS1LQ5PSV4 323 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 MSANTD2Q6P1R3 559 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 SERPINB11Q96P15 392 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 TTLL2Q9BWV7 592 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 TKTL2Q9H0I9 626 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 OSER1Q9NX31 292 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 MAFFQ9ULX9 164 aa27.27■■□□□ 1.96
ATPAF1-202ENST00000371937 KRT14P02533 472 aa27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 LINC00271P0C7V0 271 aa27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 CALCOCO2Q13137 446 aa27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 CASP8Q14790 479 aa27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 SP7Q8TDD2 431 aaPredicted RBP27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 GIPC2Q8TF65 315 aa27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 TMPRSS4Q9NRS4 437 aa27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 OLA1Q9NTK5 396 aaKnown RBP27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 WHRNQ9P202 907 aa27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 KIAA1671Q9BY89 1806 aa27.26■■□□□ 1.95
ATPAF1-202ENST00000371937 TLL1O43897 1013 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 DNAJB2P25686 324 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 CCR1P32246 355 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 NR2C2P49116 596 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 C1orf228Q6PIY5 440 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 CASP10Q92851 521 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 SNF8Q96H20 258 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 GDAP1L1Q96MZ0 367 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 TMEM121Q9BTD3 319 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 CYP4F11Q9HBI6 524 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 GRHL1Q9NZI5 618 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 SGK1O00141 431 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 MAP2K7O14733 419 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 RBP3P10745 1247 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 ITIH2P19823 946 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 ADCY8P40145 1251 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 HCAR3P49019 387 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 MTMR3Q13615 1198 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 NPNTQ6UXI9 565 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 ZBP1Q9H171 429 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 ARHGEF38Q9NXL2 777 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 SFMBT1Q9UHJ3 866 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 HEY1Q9Y5J3 304 aa27.25■■□□□ 1.95
ATPAF1-202ENST00000371937 EEF2KO00418 725 aaKnown RBP27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 CREB3O43889 395 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 SEC24AO95486 1093 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 FAM153BP0C7A2 387 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 CTSAP10619 480 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 KLRC2P26717 231 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 ALDH1A3P47895 512 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 PLTPP55058 493 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 PPP2R5DQ14738 602 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 TRIP13Q15645 432 aaPredicted RBP27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 FAM153CQ494X1 144 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 BBOF1Q8ND07 529 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 RSAD2Q8WXG1 361 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 NEUROG2Q9H2A3 272 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 RXFP1Q9HBX9 757 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 ANLNQ9NQW6 1124 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 ZDHHC18Q9NUE0 388 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 FAM153AQ9UHL3 310 aa27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 ZMYND8Q9ULU4 1186 aaPredicted RBP27.24■■□□□ 1.95
ATPAF1-202ENST00000371937 RARGP13631 454 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 STIP1P31948 543 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 ELF1P32519 619 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 SEMA3BQ13214 749 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 RFX8Q6ZV50 586 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 BZW1Q7L1Q6 419 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 KLHL23Q8NBE8 558 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 AUTS2Q8WXX7 1259 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 FMO2Q99518 471 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms