RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 LRRC4BQ9NT99 713 aa20.19■□□□□ 0.82
LMO4-202ENST00000370544 NQO1P15559 274 aaKnown RBP20.18■□□□□ 0.82
LMO4-202ENST00000370544 NME5P56597 212 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 DLG4P78352 724 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 CAMK2GQ13555 558 aaPredicted RBP20.18■□□□□ 0.82
LMO4-202ENST00000370544 VSIG10LQ86VR7 867 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 NOD2Q9HC29 1040 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 SCN3BQ9NY72 215 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 SERPINF2P08697 491 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 HAS1Q92839 578 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 PGLYRP2Q96PD5 576 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 CIPCQ9C0C6 399 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 CYP39A1Q9NYL5 469 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 CYP3A7-CYP3A51PA0A087WV96 503 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 MEIS2O14770 477 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 HMGCRP04035 888 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 CYP3A7P24462 503 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 SFSWAPQ12872 951 aaKnown RBP20.18■□□□□ 0.82
LMO4-202ENST00000370544 OTOAQ7RTW8 1153 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 SIK3Q9Y2K2 1263 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 TPH1P17752 444 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 TJAP1Q5JTD0 557 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 BBS7Q8IWZ6 715 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 ADAM32Q8TC27 787 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 INPP5DQ92835 1189 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 PNMA8BQ9ULN7 279 aaPredicted RBP20.18■□□□□ 0.82
LMO4-202ENST00000370544 UMODL1Q5DID0 1318 aa20.18■□□□□ 0.82
LMO4-202ENST00000370544 F8W810 466 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 SMIM22K7EJ46 135 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 PLSCR1O15162 318 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 UBTFL6P0CB48 400 aaPredicted RBP20.17■□□□□ 0.82
LMO4-202ENST00000370544 YWHAQP27348 245 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 DDHD2O94830 711 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 APOA1P02647 267 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 MLNP12872 115 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 VCLP18206 1134 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 MIPP30301 263 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 OR1E1P30953 314 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 HSPA13P48723 471 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 CASP5P51878 434 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 CNTN1Q12860 1018 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 PLD1Q13393 1074 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 ACAP1Q15027 740 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 GRTP1Q5TC63 336 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 BNC2Q6ZN30 1099 aaPredicted RBP20.17■□□□□ 0.82
LMO4-202ENST00000370544 SLC22A9Q8IVM8 553 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 TAGLN3Q9UI15 199 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 TRHDEQ9UKU6 1024 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 IPPQ9Y573 584 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 ZSCAN5CA6NGD5 496 aaPredicted RBP20.17■□□□□ 0.82
LMO4-202ENST00000370544 E5RJQ4 531 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 CD151P48509 253 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 TMC3Q7Z5M5 1100 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 MTDHQ86UE4 582 aaKnown RBP20.17■□□□□ 0.82
LMO4-202ENST00000370544 HPS4Q9NQG7 708 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 BATF3Q9NR55 127 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 DYRK1BQ9Y463 629 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 CASZ1Q86V15 1759 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 GJB6O95452 261 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 ALBP02768 609 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 PECAM1P16284 738 aaPredicted RBP20.17■□□□□ 0.82
LMO4-202ENST00000370544 PPP3CAQ08209 521 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 P3H2Q8IVL5 708 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 WDR18Q9BV38 432 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 E9PBE3 544 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 TPST1O60507 370 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 KLHL41O60662 606 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 ALDH1A2O94788 518 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 CALB2P22676 271 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 MGAT1P26572 445 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 BEX3Q00994 111 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 RCN1Q15293 331 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 KCNMB4Q86W47 210 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 ZSWIM2Q8NEG5 633 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 CCT7Q99832 543 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 MRPL9Q9BYD2 267 aaKnown RBP20.17■□□□□ 0.82
LMO4-202ENST00000370544 CTNNAL1Q9UBT7 734 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 UBIAD1Q9Y5Z9 338 aa20.17■□□□□ 0.82
LMO4-202ENST00000370544 H3BQF6 201 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 RECQL4O94761 1208 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 ITGA9Q13797 1035 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 LZTR1Q8N653 840 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 RAD54BQ9Y620 910 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 HACD1B0YJ81 288 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 RTN3O95197 1032 aaPredicted RBP20.16■□□□□ 0.82
LMO4-202ENST00000370544 TPBGLP0DKB5 382 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 GLRA2P23416 452 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 NFYCQ13952 458 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 SLC39A12Q504Y0 691 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 SPANXN3Q5MJ09 141 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 PDPK2PQ6A1A2 396 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 RETSATQ6NUM9 610 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 SCUBE1Q8IWY4 988 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 FAM9CQ8IZT9 166 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 POPDC2Q9HBU9 364 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 ATP13A1Q9HD20 1204 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 DNPEPQ9ULA0 475 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 TSPAN3O60637 253 aa20.16■□□□□ 0.82
LMO4-202ENST00000370544 RASA2Q15283 850 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms