RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 DUSP16Q9BY84 665 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 RHOBTB2Q9BYZ6 727 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 DONSONQ9NYP3 566 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 CPSF2Q9P2I0 782 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 SLC39A10Q9ULF5 831 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 LAMB2P55268 1798 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 WDR27A2RRH5 827 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 MYADML2A6NDP7 307 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 FBXO21O94952 628 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 FGFR1P11362 822 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 MGAT1P26572 445 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 CCR1P32246 355 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 MATKP42679 507 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 TUBP50607 506 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 RAB27AP51159 221 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 HADHBP55084 474 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 MRPS5P82675 430 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 TSTA3Q13630 321 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 USP10Q14694 798 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 C15orf39Q6ZRI6 1047 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 POLNQ7Z5Q5 900 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 SAPCD2Q86UD0 394 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 KAT2BQ92831 832 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 PTPRN2Q92932 1015 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 PCED1BQ96HM7 432 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 TRIM62Q9BVG3 475 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 TSSK1BQ9BXA7 367 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 SHCBP1LQ9BZQ2 653 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 CATSPERBQ9H7T0 1116 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 XAB2Q9HCS7 855 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 ABCF3Q9NUQ8 709 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 RBM22Q9NW64 420 aaKnown RBP eCLIP7.35□□□□□ -1.233e-7■■■■■ 45.5
TGFBR3-202ENST00000370399 GRHL1Q9NZI5 618 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 ZFP69BQ9UJL9 534 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 IGKV6-21A0A0C4DH24 114 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 SDR42E2A6NKP2 422 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 MSI1O43347 362 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 MTA2O94776 668 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 RPSAP08865 295 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 MAGEA9P43362 315 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 ANKRD22Q5VYY1 191 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 ZNF280DQ6N043 979 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 ZNF467Q7Z7K2 595 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 EXOC3L1Q86VI1 746 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 CYP4F11Q9HBI6 524 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 FAM8A1Q9UBU6 413 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 SNX10Q9Y5X0 201 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 KAT6AQ92794 2004 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 C2CD4BA6NLJ0 364 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 PAMP19021 973 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 PSMB4P28070 264 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 CCND3P30281 292 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 PCK1P35558 622 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 PURAQ00577 322 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 ACTN3Q08043 901 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 FAAP100Q0VG06 881 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 SLC12A1Q13621 1099 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 RASAL3Q86YV0 1011 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 ARID3BQ8IVW6 561 aaPredicted RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 CCDC185Q8N715 623 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 TMPRSS4Q9NRS4 437 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 SDK1Q7Z5N4 2213 aa7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 ZC3H4Q9UPT8 1303 aaKnown RBP7.35□□□□□ -1.23
TGFBR3-202ENST00000370399 MDM4O15151 490 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 SPTLC1O15269 473 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 CFLARO15519 480 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 AVPR1AP37288 418 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ALDH1A3P47895 512 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 GLRBP48167 497 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 TWF1Q12792 350 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 EFTUD2Q15029 972 aaKnown RBP eCLIP7.34□□□□□ -1.235e-6■■■■□ 20.9
TGFBR3-202ENST00000370399 NOMO2Q5JPE7 1267 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 TRPM8Q7Z2W7 1104 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 HOMEZQ8IX15 550 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 TMEM86AQ8N2M4 240 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 WDTC1Q8N5D0 677 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 PLD5Q8N7P1 536 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 EIF1ADQ8N9N8 165 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 GSDMBQ8TAX9 411 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 TCP10LQ8TDR4 215 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ATP6V1E2Q96A05 226 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 PGM2Q96G03 612 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 B3GALT6Q96L58 329 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 C12orf65Q9H3J6 166 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 NT5MQ9NPB1 228 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 FLRT1Q9NZU1 646 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 TMEM59LQ9UK28 342 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 DSEQ9UL01 958 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 DRG1Q9Y295 367 aaKnown RBP7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ARL2BPQ9Y2Y0 163 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 MAST2Q6P0Q8 1798 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 YJEFN3A6XGL0 299 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 E7ENQ6 273 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 ITGAVP06756 1048 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 TUSC3Q13454 348 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 TIGD5Q53EQ6 642 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 RAB6CQ53S08 254 aa7.34□□□□□ -1.23
TGFBR3-202ENST00000370399 HSP90AA5PQ58FG0 334 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms