RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 KBTBD6Q86V97 674 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 LRRC57Q8N9N7 239 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 CXorf38Q8TB03 319 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 SPPL2BQ8TCT7 592 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 C2orf15Q8WU43 125 aaKnown RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 TAF4BQ92750 862 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 HPDLQ96IR7 371 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 LOXL4Q96JB6 756 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 ZC3H10Q96K80 434 aaKnown RBP10.46□□□□□ -0.74
TPM3-210ENST00000368530 SDCBP2Q9H190 292 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 EBF3Q9H4W6 596 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 SMYD3Q9H7B4 428 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 DSEQ9UL01 958 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 CFAP47Q6ZTR5 3102 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 CHD6Q8TD26 2715 aa10.46□□□□□ -0.74
TPM3-210ENST00000368530 SOBPA7XYQ1 873 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 KPNA7A9QM74 516 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 BUB1BO60566 1050 aaPredicted RBP10.45□□□□□ -0.74
TPM3-210ENST00000368530 EPN2O95208 641 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 EGFP01133 1207 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 GZMAP12544 262 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 ARSAP15289 507 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 TCP1P17987 556 aaKnown RBP10.45□□□□□ -0.74
TPM3-210ENST00000368530 PMLP29590 882 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 GPR15P49685 360 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 TAF6P49848 677 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 GALK1P51570 392 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 ZNF132P52740 706 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 RBP5P82980 135 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 RPS6KA1Q15418 735 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 C2CD6Q53TS8 623 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 N4BP2L1Q5TBK1 243 aaPredicted RBP10.45□□□□□ -0.74
TPM3-210ENST00000368530 CCDC181Q5TID7 509 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 TXNDC8Q6A555 127 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 CEP68Q76N32 757 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 ZNF677Q86XU0 584 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 MAB21L3Q8N8X9 362 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 STKLD1Q8NE28 680 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 ANKRD7Q92527 254 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 CYFIP2Q96F07 1278 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 PKMYT1Q99640 499 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 TDP1Q9NUW8 608 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 THG1LQ9NWX6 298 aaKnown RBP10.45□□□□□ -0.74
TPM3-210ENST00000368530 CNOT8Q9UFF9 292 aaKnown RBP10.45□□□□□ -0.74
TPM3-210ENST00000368530 ITGA11Q9UKX5 1188 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 CNTN6Q9UQ52 1028 aa10.45□□□□□ -0.74
TPM3-210ENST00000368530 CNOT1A5YKK6 2376 aaKnown RBP10.44□□□□□ -0.74
TPM3-210ENST00000368530 RPP40O75818 363 aaKnown RBP10.44□□□□□ -0.74
TPM3-210ENST00000368530 RHOXF2BP0C7M4 288 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 UNGP13051 313 aaPredicted RBP10.44□□□□□ -0.74
TPM3-210ENST00000368530 CD19P15391 556 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 NSFP46459 744 aaKnown RBP10.44□□□□□ -0.74
TPM3-210ENST00000368530 RNASE9P60153 205 aaKnown RBP10.44□□□□□ -0.74
TPM3-210ENST00000368530 YWHAEP62258 255 aaKnown RBP10.44□□□□□ -0.74
TPM3-210ENST00000368530 C2orf54Q08AI8 447 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 VEPH1Q14D04 833 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 ST3GAL2Q16842 350 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 PPP1R15BQ5SWA1 713 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 MON1AQ86VX9 555 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 RHOT2Q8IXI1 618 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 SYCE1Q8N0S2 351 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 THEM5Q8N1Q8 247 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 CAMKK1Q8N5S9 505 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 NOA1Q8NC60 698 aaKnown RBP10.44□□□□□ -0.74
TPM3-210ENST00000368530 MS4A14Q96JA4 679 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 BTBD6Q96KE9 485 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 MYRFLQ96LU7 910 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 RHOXF2Q9BQY4 288 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 C11orf70Q9BRQ4 267 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 NUP85Q9BW27 656 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 ABI2Q9NYB9 513 aaPredicted RBP10.44□□□□□ -0.74
TPM3-210ENST00000368530 HMGXB4Q9UGU5 601 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 ZMYM5Q9UJ78 669 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 SDK1Q7Z5N4 2213 aa10.44□□□□□ -0.74
TPM3-210ENST00000368530 LAMA1P25391 3075 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 KCNK3O14649 394 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 RNF40O75150 1001 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 CYP1A1P04798 512 aaPredicted RBP10.43□□□□□ -0.74
TPM3-210ENST00000368530 CYP1A2P05177 515 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 P4HA1P13674 534 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 PRLRP16471 622 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 DDX6P26196 483 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM3-210ENST00000368530 ATICP31939 592 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 GJA4P35212 333 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 TNNC1P63316 161 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 NOMO3P69849 1222 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 SHC2P98077 582 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 GRSF1Q12849 480 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM3-210ENST00000368530 ZNF268Q14587 947 aaPredicted RBP10.43□□□□□ -0.74
TPM3-210ENST00000368530 MESDQ14696 234 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 CCDC142Q17RM4 750 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 PLK5Q496M5 336 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 STPG1Q5TH74 334 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 SDHAF4Q5VUM1 108 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 SLFN11Q7Z7L1 901 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 NT5DC3Q86UY8 548 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 METTL23Q86XA0 190 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 NT5DC4Q86YG4 428 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 CREG2Q8IUH2 290 aa10.43□□□□□ -0.74
TPM3-210ENST00000368530 MCOLN2Q8IZK6 566 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms